LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211681g00009	ATGGATTCAAAAAGGGAATATGGAAGTGCTGCTGCTCAACATTCCAAACGGAGACATGAAGAAGATTCACAACAGCCAAACAACTGTATCGTTATTGGAAAATATTTGAGGTGCAGATTGGACATAGAGAAAGACGTTGCGCCCCGTGTGGCTGCATTAGTCCAAAAATTGGTGCGGGAGGAGTTGGAACGCCAAGTACTTCTTCTAAGACCAAGTATTAACGAGAGTGGCGCAGCTGGGGTACCGGTCAAAATGTTTGAGCTGGTTTTCAAGAATGATTTTCCTGCCACAGTGTTTACACACTCCCACATCAAAGCTAAAGATGGCAGCCATATTCAGATTGCTTTACGCAATACTAGGTCTCGGCTAACAGTCACTGAAGGTCCACTATCTTCCATTAAGGTCAAGATTTGTGTCCTTAATGGTGAGTTCGGTGGTGATGATAACGAGTACTGTTGGACCACAATGGAATTCAAGGCCAATATCTCCCGAGAAAGAGAGAATAGAAGCAAGTTGCTGAAAGGAGATACGGTTATTACACTGAACAATGGAGTTCGTTACATCGATAAAATCATGTTTACTGACAACTCAAAGTGTACATGGAGTCGCCATTTCAGGCTAGGAGCCATTGTGGTGTCAACTTCCGATGAAGCTAACATCAAAGAAGCCATAAGTAACCCTTTTATAGTCAAGGACACTAGAGGAGATTCGAATCAGAAACACTACCCTCCAGCACTAAATGATGAAGTATATCGTTTGGAAAATATATCAAAAAATGGGAAAATCCATGAGCGGCTGCGTGAGATTGGAATTAACACGGTTAAGGATCTGTTGCAGCTATACGAAACCAATCCATCTTTATTACGACAGAAATTTGGTAAAAGTAGTTCAAGAAAGGTAGAAAGAACAATAAAGTATGCTAACACATGTGCTGTGGAAGTGATCACCCAAGGACAAAATGAAATGCCTTGGGAATGCAATGGTGCTCCGTATTTGCAAGTGCTTCATTATTTGCCAACTGCACACCAAGAATTAAGCTATGGTGGTGGTCAAGTAGAAGAAAACCAGGAGTTTGGTCAACCGTCAACTTCAACGTCACTCGTTGGTGAAGCAGCTTGCAATAATAACCAACTTGGTTTCCCGGATTTATTGTCTTCCGGAATATGCATAGAAGCCTATCATCATCATCTCTCAATTCTTGGACCCACCCATGGAGAATGA	1221	0.4201	MDSKREYGSAAAQHSKRRHEEDSQQPNNCIVIGKYLRCRLDIEKDVAPRVAALVQKLVREELERQVLLLRPSINESGAAGVPVKMFELVFKNDFPATVFTHSHIKAKDGSHIQIALRNTRSRLTVTEGPLSSIKVKICVLNGEFGGDDNEYCWTTMEFKANISRERENRSKLLKGDTVITLNNGVRYIDKIMFTDNSKCTWSRHFRLGAIVVSTSDEANIKEAISNPFIVKDTRGDSNQKHYPPALNDEVYRLENISKNGKIHERLREIGINTVKDLLQLYETNPSLLRQKFGKSSSRKVERTIKYANTCAVEVITQGQNEMPWECNGAPYLQVLHYLPTAHQELSYGGGQVEENQEFGQPSTSTSLVGEAACNNNQLGFPDLLSSGICIEAYHHHLSILGPTHGE	406

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211681g00009	406	MobiDBLite	consensus disorder prediction	1	25	-	-
	Stsc211681g00009	406	PANTHER	OS02G0177800 PROTEIN	40	313	IPR012416	GO:0005516
	Stsc211681g00009	406	MobiDBLite	consensus disorder prediction	1	24	-	-
	Stsc211681g00009	406	Pfam	Calmodulin binding protein central domain	245	310	IPR046830	-
	Stsc211681g00009	406	Pfam	Calmodulin binding protein-like N-terminal domain	87	232	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211681g00009	Stsc-Chr211681	54293	56434	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211681g00009	1	313	Calmodulin-binding Proteins	AT5G62570	34.700	1.30e-52	178

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211681g00009	-		-	aip:107646520	401.749