Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211680g00004 ATGTATTGTGGAATATGTCACTCTGATCTTCACATGTTGAAGAATGAATGGGGAAATACCACTTTTCCTATAGTACCTGGGCATGAGGTTGCTGGAGTAGTGACAGAGGTAGGAAGCAAGGTACAAAATTTCAAAGTTGGAGACAAAGTTGGAGTGGGAGTGATGGTTGCATCCTGCAAATCATGCGAGAGCTGTGCCGGTAATCTTGAGAATTTCTGTCCACAAATGGTCCTCACATACAGTGCCAAGAACAAAGATGGCACCATCACCTACGGCGGCTACTCTGACTCAATGGTCATCGACGAAGCCTTCGCCATCCGCATCCCGGATAACCTTTCTCTTGATGTAGCTGCTCCTTTGCTTTGTGCCGGAATCACGGTGTATAGCCCTCTCCGGTATTTCGGACTTGACAAGCCTGGTTTGCATGTTGGTGTGGTTGGTCTTGGTGGTCTCGGCCATGTGGCTGTCAAGTTTGCCAAAGCTTTTGGTTGTAAAGTAACGGTTATTAGTACTTCTCCTAACAAAAAGAAAGAAGCCATTGAAAGTTTAGGAGCAGATTCGTTTCTTGTAAGTAGAGATCAAGATCAGATGAAGGGTGCAGTCTATTTAATTGGTGTTTTTATTTTGGCTCTATTGAAGACTAATGGAAAACTTGTAATGGTTGGTTTACCAGAAAAACCTCTGGAGTTGCCAATATTTTCACTTACTACTGAAAGTCGATAG 723 0.4357 MYCGICHSDLHMLKNEWGNTTFPIVPGHEVAGVVTEVGSKVQNFKVGDKVGVGVMVASCKSCESCAGNLENFCPQMVLTYSAKNKDGTITYGGYSDSMVIDEAFAIRIPDNLSLDVAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGCKVTVISTSPNKKKEAIESLGADSFLVSRDQDQMKGAVYLIGVFILALLKTNGKLVMVGLPEKPLELPIFSLTTESR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211680g00004 240 Gene3D - 2 122 - -
Stsc211680g00004 240 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 27 41 IPR002328 GO:0008270|GO:0016491
Stsc211680g00004 240 Pfam Zinc-binding dehydrogenase 150 193 IPR013149 -
Stsc211680g00004 240 FunFam Cinnamyl alcohol dehydrogenase 123 240 - -
Stsc211680g00004 240 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 112 237 IPR036291 -
Stsc211680g00004 240 Gene3D - 123 238 - -
Stsc211680g00004 240 Pfam Alcohol dehydrogenase GroES-like domain 2 107 IPR013154 -
Stsc211680g00004 240 SUPERFAMILY GroES-like 2 140 IPR011032 -
Stsc211680g00004 240 CDD CAD1 2 235 IPR047109 GO:0016616
Stsc211680g00004 240 PANTHER ALDEHYDE REDUCTASE 1 237 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211680g00004 Stsc-Chr211680 2961 5934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211680g00004 1 235 Monolignol Biosynthesis Gene Families AT4G37980 65.182 2.40e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211680g00004 K23232 - mnt:21385910 365.54