Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211679g00012 ATGGAAGAACAAGCTGCTTCAAACCCCATCAAAATCTCCAACCGCACTCTCGTATTCCCTTCTCGCACTCCCTTCCACCAACACCACGCCCTCCCACTCTCCCCCCTCGACAACGACCCCAACCTCCGCCTCACCTTCCGCTACCTCCGCGTCTACATTTCCTCCCACTCCGACCCCTATGACGTCATCTTCTCCTCCCTCTCCCAAGCTCTTATTCACTACTACCCACTCGCCGGCACTCTTCTTCACCATTCAGAAAACAACCGCCTTCAGAACTGGTGCACCGCCGCTCAGGGAGTCCCCCTCATTCGCGCCACCGCCCCAGGCATCACCCTCGAATCGGTAAACTACCTCGACGACCCGGATTTCACCTTCGTTGAGAAGCTAGTACCCGATCCGGGACCCGAGGAGGGAATGGAGCACCCCTGCATGCTCCAAATAACGGTGTTCGCGTGCGGTGGGTTCACGCTGGGTGCTGCCATGCACCACGCGCTCAACGACGGTATGGGCGGGAGCTTGTTCTTCAACGCGGTGGCCGAGTTGGCTCGCGGGTCGAATCGGATATCGGTTGAACCGGTTTGGAACCGTGATGTATTGTTGGGAGCCAGGAACCCGCCCCGGGTGGATTCACCGTTGATAGGTGAGTTTCTGAGATTGGAGAAGGGGTTCTTGCCGTACCAAGAGGAAGCCGGTGATGATGTTGTGAGGGAGTGCTTCCACATTGATGATGAGTCCTTGGAAGTGTTCAAGACATCATTGTTTGAACAATCTGGTCTCAAATTCACCACTTTTGAGGCTCTTGCTGCTTACATTTGGGGGTCCAAGGTTAAGGCGACTGGAATGAAGTTTGATGAAAAGGTTAAGTTAGCATACTCGATTAACATAAGAAGATTGGTAAAGCCAGCACTGCCAGCAGGTTATTGGGGTAACGGTTGTGTTCCAATGTATGTTGAGGTGAATGTGAAGGATTTAATAGAGCAACCCATTTGGGAAACAGCGCAGCTAATAAACAAGAGCAAAAGCCAGGTGAGTGATGAGTACGTTCGGTCATACATTGATTTTCAGGCACTGCATTATGGGGATGGGATCACTGCTGGGAAAGGGAATGGGATTACTGGGTTCACGGATTGGAGACACTTGGGCCACTCCTCTGTGGACTTTGGATGTGGAGGCCCAGTTACTGTTTTGCCACTTGGCAGGAATCTCCTTGGGAGTAATCACCCTTGTTACTTCTTGCCTTATTCAACTGCTACTGCCAATCATGCTAAAAAGAAGGGTTTCAAGGTTCTGGTTACTCTGCCTCAATCTGCTTTGCCTGCTTTTAGAGAGGATATGCAAGTTTTTGTCCACTAG 1353 0.5159 MEEQAASNPIKISNRTLVFPSRTPFHQHHALPLSPLDNDPNLRLTFRYLRVYISSHSDPYDVIFSSLSQALIHYYPLAGTLLHHSENNRLQNWCTAAQGVPLIRATAPGITLESVNYLDDPDFTFVEKLVPDPGPEEGMEHPCMLQITVFACGGFTLGAAMHHALNDGMGGSLFFNAVAELARGSNRISVEPVWNRDVLLGARNPPRVDSPLIGEFLRLEKGFLPYQEEAGDDVVRECFHIDDESLEVFKTSLFEQSGLKFTTFEALAAYIWGSKVKATGMKFDEKVKLAYSINIRRLVKPALPAGYWGNGCVPMYVEVNVKDLIEQPIWETAQLINKSKSQVSDEYVRSYIDFQALHYGDGITAGKGNGITGFTDWRHLGHSSVDFGCGGPVTVLPLGRNLLGSNHPCYFLPYSTATANHAKKKGFKVLVTLPQSALPAFREDMQVFVH 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211679g00012 450 Gene3D - 9 213 IPR023213 -
Stsc211679g00012 450 Pfam Transferase family 10 446 - -
Stsc211679g00012 450 Gene3D - 224 444 IPR023213 -
Stsc211679g00012 450 PANTHER ACYL TRANSFERASE 4 12 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211679g00012 Stsc-Chr211679 44126 46173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211679g00012 54 399 Monolignol Biosynthesis Gene Families AT5G48930 28.571 1.20e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211679g00012 - - gmx:100817021 626.706