Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211679g00003 | ATGATTTGGCTCTTCTTTTTTCTTGTTTTCACCAATGCAAACTCACATGAGGCCAAGAATGAAAGCAGAAAAGTTATATCAGTTGGGGCAATCATTGATGCTGATTCTCGTGTAGGGAAAGAGCAGAAAGTAGCCATGGAAATTGCAGCACAAAGGTACAATAGCACTTCAAAGACCTACAAGTTGTCTCTCCATTTTCAAAACTCCACCATGGACCCCATAAGTGGCACCATTGTTGCTGAAGAAATGATAAGAATGCAGAAAGTGCAAGTAATTTTAGGATTGTACACATGGCCAGAAGCAGCTCTTGTAGCTGAAATAGGATCAGGATTTCAAGTTCCTGCTATATCCTATGCAGAACCTTCCATTACTCCACCATTGATGTCAATTCGGTGGCCTTTTTCGGTAAGAATGGCTAATGGTGGCAGAGCATATGTAAAATGCATTGCAGATATAGTTAAAGCTTATGGCTGGCAAAGAGTAATAGCCATCTATGAAGATGATGCCTATGGTGGAGAACAAGGGATGCTAGCCCTGTTATCTGAGACCCTCCAAGATGCAAATTCAATGATTGAGTACAATTTTGTTCTTCCACCAATTTCTTCTCTGAATGATCCTAGAGGAGTAGTGCAAGACGAGCTGCTTAAGTTAATGAATACACAACAATCACGAGTGTTTATCGTGCTGCAATCATCGCTAGAGATGGCGATTCACTTGTTCAGAGAAGCTTCAAATATAGGACTTGTGGATAGAGATTCAGTTTGGATAATCCCAGAGAGCATAACCAATCTAATTGACTCCATCAACAGGTCTTCCATTTCATACATGGAAGGAGCTATAGGAATCAAGAACTACTACTCTGAAGGAAGCAACAAGTACCAAGATTTTGAGGCTCAGTTTCAGAGAACTTTCTGGACAAGAAACCCCGAAGAAGATAACCGAAAGCCTGGATTTTTTGCTTTGCAAGCATATGATAGCATTAACATTGTGACTCAAGCACTAGAAAGAATGACCAATGGCAATAGCAGCACAAAGACCTTACTAAAAGAAATACAATCAAGCAATTTTTCTGGTTTAAGTGGTCATATTGAATTTGAAGATGGAAAACTGCTGCAGAATCCTATCTTGAGGGTAGTAAATGTGGTTGGGAAGAGTTACAAGGAATTGTGCTTTTGGACTCAGCAACATGGATTCTCCACAAGCTTCCATGCAGGAAAAGATGGTGGAAATTATAACCATGTTTCAGAATGCTTCAGTGGTGTACTTTGGCCTGGGAATTTGCATAGGACACCAAAGGGATGGAAAATGCCTACAAAACAAAAACCTATGCAAATCGCGGTCCCAGGGAGAACTACATTTTCCAGGTTTGTCAAGGTTGGTTATGGAAAGAATCGGAATCTCGATAAGTATGATGGATTCTGCATCAAGATTTTTGAGCAGGTGCACAAACATTTGGGGTATGATCTACCCTTTCAGTACCATGCTATCAATTGCACCTATCCTGATTTGGTTCAATTAGTCTATAACAAGACTTATGATGCTGTTGTTGGGGATATAACCATACTAGAGGAAAGATTGCCATACGTGGACTTCACTGTGCCATATGCAGAATCAGGATTGTCAATGTTAGTTCCAGCAAAGTCTGAAGAATCAGCATGGATGTTCACCAAGCCATTTACCTGGCAACTTTGGACAGTTACAGGGGCCATCCTGATCTACACAATGGTAGTGGTTTGGCTACTTGAGAAAGAACCTAATCCAGAGTTTCATGGCAATTGGAAGAGCCAGATCAGCACTGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTTGCTCACAGGGAGAAAATGTATAGAAAGTTAACTCGGGTGGTGATGGTGTCATGGCTCTTCCTAGTTCTGATTCTTAATTCAAGCTACACTGCAAGTCTTTCTTCAATGCTCACTGTGAAACAGCTGCAGACAAATGTCACAAACATTGAGTGGCTGAAGAAGAACAACATGAAGATTGGTTGTGATGGTGACTCATTTGTAAGAAATTACCTGGAGGATGTAGAGAAGTTCAAGCCAGAGAACATTATCAACATAACCAGTGAAGACAAATACATTGATGCATTTGCAAATGGTAGCATAGTAGCTGCATTTCTTGAATTGCCCTATGAAAAAGTCTTCATTAGTGAATACTGTGATGGATACACTGCCTCCACTCCCAGAACTAGATTTGGAGGATTAGGATTTGTAAATGTTCCAGAAAGGCTCACCAGTGACAAGAGATGTTTCCAGAGCTATCTTACATCTGTCAGAAAACGGAGAGCTGAAGAAGCTGGAAGAGGAATGGTTGTTGAGTGCATCAGAGAAATGCTCCAACAACATGACCTCCAACGGCATGGAAAGCTTGAGTCTGAGAAGCTTGTGGATTCTATTCGTCATCTCCGGTGTCACTTCTACTATTTGTCTGCTACTATCAGCAATCCAATGCCCGTATTGAATGTTATTCCACGTGTAACGGTGGCAGTAACAGCAGCGGCGGCGCCAGTAGTAGGAGTGGTGCTATCTGCGCGTTCACGCACAAGAGGAAGAAAGCCACTCACGCCAATTGGAAGAGGCGGAGCCGCACGCCGCATAAGTTCCAAGCCGCTCACACTCACAGTCACAGCAATGCGAGCCGTCGTTCAGCGAGTCGCCTCCGCATCCGTCGAGGTTGAAGGCCGCATCGTCTCCGAGATCGGCCCTGGACTCCTCGTCCTTGTCGGAATCCACGAATCCGATTCCGAAGCCGACGCCGATTACATATGCAGGAAGGTCTTGAATATGAGGTTGTTCCCAAATGAAAATACAGGAAAAGCATGGGACCATAGCGTGATGCAGAAAAATTATCAAGTTCTTTTAGTGAGCCAGTTTACCTTGTATGGATTCCTCAAGGGTAACAAGCCAGATTTTCATGTTGCTATGCCTCCACAGAAAGCAAAGCCCTTCTATGCTTCTTTAGTTGACAAGTTCAGGAATGCCTATAACTCAGATGCTATCAGGGATGGTGTGTTTGGAGCGATGATGAAGGTATGTAACATCACCCTGACTCTTGTGTGA | 3084 | 0.4283 | MIWLFFFLVFTNANSHEAKNESRKVISVGAIIDADSRVGKEQKVAMEIAAQRYNSTSKTYKLSLHFQNSTMDPISGTIVAEEMIRMQKVQVILGLYTWPEAALVAEIGSGFQVPAISYAEPSITPPLMSIRWPFSVRMANGGRAYVKCIADIVKAYGWQRVIAIYEDDAYGGEQGMLALLSETLQDANSMIEYNFVLPPISSLNDPRGVVQDELLKLMNTQQSRVFIVLQSSLEMAIHLFREASNIGLVDRDSVWIIPESITNLIDSINRSSISYMEGAIGIKNYYSEGSNKYQDFEAQFQRTFWTRNPEEDNRKPGFFALQAYDSINIVTQALERMTNGNSSTKTLLKEIQSSNFSGLSGHIEFEDGKLLQNPILRVVNVVGKSYKELCFWTQQHGFSTSFHAGKDGGNYNHVSECFSGVLWPGNLHRTPKGWKMPTKQKPMQIAVPGRTTFSRFVKVGYGKNRNLDKYDGFCIKIFEQVHKHLGYDLPFQYHAINCTYPDLVQLVYNKTYDAVVGDITILEERLPYVDFTVPYAESGLSMLVPAKSEESAWMFTKPFTWQLWTVTGAILIYTMVVVWLLEKEPNPEFHGNWKSQISTALWFTFSSLFFAHREKMYRKLTRVVMVSWLFLVLILNSSYTASLSSMLTVKQLQTNVTNIEWLKKNNMKIGCDGDSFVRNYLEDVEKFKPENIINITSEDKYIDAFANGSIVAAFLELPYEKVFISEYCDGYTASTPRTRFGGLGFVNVPERLTSDKRCFQSYLTSVRKRRAEEAGRGMVVECIREMLQQHDLQRHGKLESEKLVDSIRHLRCHFYYLSATISNPMPVLNVIPRVTVAVTAAAAPVVGVVLSARSRTRGRKPLTPIGRGGAARRISSKPLTLTVTAMRAVVQRVASASVEVEGRIVSEIGPGLLVLVGIHESDSEADADYICRKVLNMRLFPNENTGKAWDHSVMQKNYQVLLVSQFTLYGFLKGNKPDFHVAMPPQKAKPFYASLVDKFRNAYNSDAIRDGVFGAMMKVCNITLTLV | 1027 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211679g00003 | 1027 | Pfam | Ligand-gated ion channel | 561 | 674 | IPR001320 | GO:0015276|GO:0016020 | |
Stsc211679g00003 | 1027 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 27 | 746 | IPR015683 | - | |
Stsc211679g00003 | 1027 | SUPERFAMILY | DTD-like | 885 | 1019 | IPR023509 | - | |
Stsc211679g00003 | 1027 | SUPERFAMILY | Periplasmic binding protein-like I | 23 | 434 | IPR028082 | - | |
Stsc211679g00003 | 1027 | Gene3D | - | 886 | 1023 | IPR023509 | - | |
Stsc211679g00003 | 1027 | CDD | PBP1_GABAb_receptor_plant | 27 | 402 | IPR044440 | - | |
Stsc211679g00003 | 1027 | Gene3D | - | 452 | 551 | - | - | |
Stsc211679g00003 | 1027 | FunFam | Glutamate receptor | 552 | 682 | - | - | |
Stsc211679g00003 | 1027 | Gene3D | - | 144 | 315 | - | - | |
Stsc211679g00003 | 1027 | Gene3D | - | 20 | 140 | - | - | |
Stsc211679g00003 | 1027 | Pfam | D-Tyr-tRNA(Tyr) deacylase | 887 | 1019 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Stsc211679g00003 | 1027 | SUPERFAMILY | Periplasmic binding protein-like II | 419 | 745 | - | - | |
Stsc211679g00003 | 1027 | SMART | GluR_14 | 444 | 754 | IPR001320 | GO:0015276|GO:0016020 | |
Stsc211679g00003 | 1027 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 468 | 721 | IPR001638 | - | |
Stsc211679g00003 | 1027 | FunFam | Glutamate receptor | 438 | 552 | - | - | |
Stsc211679g00003 | 1027 | Gene3D | - | 322 | 446 | - | - | |
Stsc211679g00003 | 1027 | Pfam | Receptor family ligand binding region | 43 | 381 | IPR001828 | - | |
Stsc211679g00003 | 1027 | NCBIfam | D-aminoacyl-tRNA deacylase | 886 | 1020 | IPR003732 | GO:0002161|GO:0005737|GO:0051499 | |
Stsc211679g00003 | 1027 | Gene3D | - | 552 | 686 | - | - | |
Stsc211679g00003 | 1027 | FunFam | Glutamate receptor | 145 | 314 | - | - | |
Stsc211679g00003 | 1027 | FunFam | D-aminoacyl-tRNA deacylase | 886 | 1023 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211679g00003 | Stsc-Chr211679 | 4708 | 10808 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211679g00003 | 26 | 755 | Ion Channels | AT2G29120 | 33.640 | 1.11e-127 | 410 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211679g00003 | - | - | aip:107623836 | 1376.3 |