Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211679g00001 ATGCCATCATATTCAGTAGTTGCTAAAGTGGACGTTGGTCACATGAGGCAATTGGCTGCAAGGAAAAATGTTTCATGCATATTGGTTTTTGGAGACTCAAGTGTTGACCCTGGAAACAACAATGTCCTTGGCACCACCATGAAAAGCAACTTCCCTCCTTATGGCAAGAACTTCTTTAACAGCCGCCCAACCGGAAGGTTTAGTAATGGCAGACTTGCCACTGATTTCATTGCTGATGAAGCAGTGGGGTTCAGAAAAATAGTTCCACCGTTTCTTGACCCAAATTTGAAGCTAGAAGATCTGCCATACGGTGTTAGTTTTGCATCAGCAGCTACAGGCTATGATGATCTTACTGCTAATATTTCGAATGTTCTACCAGTATCCAAACAAATAGAGTATTTCGAACATTACAAGATTCACATGAGGAAATTGTTGGGTGAGGAAAGAGCTGAGTTCATTATCAGGAATGCATTATATGTTCTAAGTATGGGCACAAATGATTTCCTACAAAACTATTTCTTGGAGGATACTCGCCAAAAGCAATACAGCTTGCAGAAGTTTGAGGATTTCTTGCTCTCCCAAATGTCTAAGGACATTGAGATGATGCATAGGCTAGGGGCCCAAAAGCTAGTAGTTGTAGGGGTGCTACCTCTTGGGTGCATTCCACTTATGAGGACCCTTAAGAACACCAACAACACTTGTGTTACAACTTTGAACGATGTGGCCAACTCATTCAATGCAAAGCTGTCAAAACAATTGGCCCAATTGAAGGCAAAGTTGGGCTTGACAACAGCGTATGTTGATGTTTTTGGCATGATCCAAAGAGCAGTATCAGAGCCCAAAATATATGGTTTTGTGGAAGCTACAAAGGGATGCTGTGGAACAGGGTTGGTTGAATATGGTGATTCATGCAGAGGGTTGAGTACTTGTTCAAATCCTGATGAATATATCTTCTGGGATGCTGTTCATCCAACACAGAAGATGTACAAGATTATCGCTGATGAGGCCATGGAATCCATTGCTAATGAATTTGCTTAA 1038 0.4162 MPSYSVVAKVDVGHMRQLAARKNVSCILVFGDSSVDPGNNNVLGTTMKSNFPPYGKNFFNSRPTGRFSNGRLATDFIADEAVGFRKIVPPFLDPNLKLEDLPYGVSFASAATGYDDLTANISNVLPVSKQIEYFEHYKIHMRKLLGEERAEFIIRNALYVLSMGTNDFLQNYFLEDTRQKQYSLQKFEDFLLSQMSKDIEMMHRLGAQKLVVVGVLPLGCIPLMRTLKNTNNTCVTTLNDVANSFNAKLSKQLAQLKAKLGLTTAYVDVFGMIQRAVSEPKIYGFVEATKGCCGTGLVEYGDSCRGLSTCSNPDEYIFWDAVHPTQKMYKIIADEAMESIANEFA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211679g00001 345 Pfam GDSL-like Lipase/Acylhydrolase 27 335 IPR001087 GO:0016788
Stsc211679g00001 345 PANTHER GDSL ESTERASE/LIPASE EXL3 24 335 - -
Stsc211679g00001 345 CDD SGNH_plant_lipase_like 26 340 IPR035669 -
Stsc211679g00001 345 Gene3D SGNH hydrolase 12 343 IPR036514 -
Stsc211679g00001 345 FunFam GDSL esterase/lipase APG 16 341 - -
Stsc211679g00001 345 SUPERFAMILY SGNH hydrolase 157 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211679g00001 Stsc-Chr211679 588 2919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211679g00001 19 345 Pollen Coat Proteome AT1G75930 35.015 1.32e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211679g00001 - - gmx:100819691 499.975