Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211675g00004 ATGTCATCAATTATATTAGTATGCATGTTTAGCATTGCATCGTGTTCTGAATTAAACTCAAATTATTACTACCAAACATGTCCACAGGCACTCTCCATAATCAGAAATGCAGTGATGAGTGCAGTTGCAAAAGAGCACCGCATGGGTGCATCCTTGCTCCGTCTCCATTTCCATGATTGCTTTGTCAATGGATGTGATGCATCGGTTCTATTAGATGACACATCGAGTTTCACTGGAGAGAAGACAGCTGGTCCAAATGTGAATTCTCTGAGAGGTTTTGATGTAATTGATGACATTAAAACTAAGCTTGAGGCTGCTTGTCCTGCTGTTGTTTCTTGTGCTGATATTCTTGCTCTCGCTGCTCGTGATTCTGTTGTTGCATTGGGGGGTCCATCATGGAATGTTGGGTTAGGGAGAAGAGACTCAACCACTGCAAGTAAAGATGCTGCAACTAAGGATATCCCATCCCCTTTGATGGATCTAAATCAACTTATCTCTGCTTTTTCAAATAAGGGCTTTAACGCCAATGAGATGGTTGTCCTCTCAGGAGCTCACACAACAGGGGAAGCTAGATGCCAATTATTTCGAGGAAGGCTTTACAACGAAACAAGCATTGATTCAACTTTGGCAACATCACTGAAGCAGAATTGTCCGACCACTGGCAACGACACCAACCTTTCGCCGCTCGATGCCACCACGAATGTCCTGTTTGACAATGCCTACTTTAAGAACCTTGTCAACCAAAAAGGGCTTCTACACTCTGATCAGCAACTCTTCAGTGGTGGTTCCACTGATTCTCAGGTCACCACCTATAGCAACAACCCTGCAAGCTTCTTTGTCGAATTTGCAAGCGCCATGGTTAAGATGGGAAACCTTAGCCCTTTGACAGGGAATGACGGCCAAATTCGTACTAACTGTCACAAAATTAATTAA 933 0.4352 MSSIILVCMFSIASCSELNSNYYYQTCPQALSIIRNAVMSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKTAGPNVNSLRGFDVIDDIKTKLEAACPAVVSCADILALAARDSVVALGGPSWNVGLGRRDSTTASKDAATKDIPSPLMDLNQLISAFSNKGFNANEMVVLSGAHTTGEARCQLFRGRLYNETSIDSTLATSLKQNCPTTGNDTNLSPLDATTNVLFDNAYFKNLVNQKGLLHSDQQLFSGGSTDSQVTTYSNNPASFFVEFASAMVKMGNLSPLTGNDGQIRTNCHKIN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211675g00004 310 FunFam Peroxidase 21 160 - -
Stsc211675g00004 310 CDD secretory_peroxidase 17 309 IPR033905 GO:0004601|GO:0042744
Stsc211675g00004 310 Gene3D - 21 306 - -
Stsc211675g00004 310 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 SUPERFAMILY Heme-dependent peroxidases 18 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 Pfam Peroxidase 35 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Stsc211675g00004 310 ProSiteProfiles Plant heme peroxidase family profile. 17 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PANTHER PEROXIDASE 72-RELATED 15 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00004 310 FunFam Peroxidase 155 289 - -
Stsc211675g00004 310 Gene3D Peroxidase, domain 2 155 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211675g00004 Stsc-Chr211675 9211 12577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211675g00004 16 310 Peroxidase AT5G05340 61.616 1.06e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211675g00004 K00430 - gmx:100777191 514.998