Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211675g00001 ATGGCTCCTAAAAATCTGAAATATGTTATTGGTGTTGTGGGTGTTATTGTTTGTTTGGCAACAGTTTTGAAGCCAACATATGGTGATGGGTTGTGTGCTGATTATTATGAGAGAGTGTGCCCACAAGCATTGGCAACCATTGAAGCTGTTGTGAAGCAAGCAATCAATCGTGAATCAAGAAATGGAGCATCTTTGTTGCGTTTACATTTCCATGATTGCTTCGTTAATGGCTGTGATGGATCGGTTCTACTGGATGACACTCCTGATATGAAGGGAGAGAAGACAGCAATCCCAAATAACAACTCACTGAGAGCTTTTGATATTGTTGATGAAATCAAAGCAGCTGTGGACAAAGCTTGCAATGGCCCTGTTGTGTCTTGTGCTGATATTCTTGCCTTTGCTGCTCGTGATTCTGTATCTATTTTGGGAGGTAGACAATACTACTACAATGTGTTGTTAGGCAGAAGAGATGCAACATCTGCATGCATGGAGGATGCAAACAACCAGCTTCCGTTGGCGAACGCCGCCTTCTCCGAAATTCTCAGCAAAAAATTCCAGCCTAAAGGGCTGAACCTCAAAGACATGGTGGTCCTCTCCGGCGCACACACCATTGGATTTGCAAAATGTGATTCCTTCAAAGGAAGGCTCTACAATGACACCAACATTGACCCGAATTTTGCAACATCATTGAAGCAATCTTGTCCTCCCAGTGGTGGATCAAATTTGACAGCTTTGGATGTTAGTTCTGCTGCAACTTTTGACACCAAATATTACTCTGATCTGTTGCAGGAAAAGGGTGTTCTTCATTCTGATCAAGAACTCTACAAGGGTAATGGTTGTGAGAGTGATCAATTGGTGAAGCTCTATAGTAATAACCCTGATGCTTTTGCTAAGGATTTTGCAGTTTCCATGGTTAACATGGGTAACATTAAGCCTTTGCTTGGGAATCAAGGAGAAGTTAGGTCTAATTGCAGAAAAGTCAATTCTGGATACTACAAGTATTGA 1005 0.4189 MAPKNLKYVIGVVGVIVCLATVLKPTYGDGLCADYYERVCPQALATIEAVVKQAINRESRNGASLLRLHFHDCFVNGCDGSVLLDDTPDMKGEKTAIPNNNSLRAFDIVDEIKAAVDKACNGPVVSCADILAFAARDSVSILGGRQYYYNVLLGRRDATSACMEDANNQLPLANAAFSEILSKKFQPKGLNLKDMVVLSGAHTIGFAKCDSFKGRLYNDTNIDPNFATSLKQSCPPSGGSNLTALDVSSAATFDTKYYSDLLQEKGVLHSDQELYKGNGCESDQLVKLYSNNPDAFAKDFAVSMVNMGNIKPLLGNQGEVRSNCRKVNSGYYKY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211675g00001 334 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Stsc211675g00001 334 Gene3D - 34 325 - -
Stsc211675g00001 334 PANTHER PEROXIDASE 72-RELATED 30 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 ProSiteProfiles Plant heme peroxidase family profile. 30 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 FunFam Peroxidase 34 180 - -
Stsc211675g00001 334 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 SUPERFAMILY Heme-dependent peroxidases 31 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc211675g00001 334 CDD secretory_peroxidase 30 327 IPR033905 GO:0004601|GO:0042744
Stsc211675g00001 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc211675g00001 334 FunFam Peroxidase 171 307 - -
Stsc211675g00001 334 Gene3D Peroxidase, domain 2 171 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211675g00001 Stsc-Chr211675 1238 3314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211675g00001 31 328 Peroxidase AT5G05340 51.495 1.21e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211675g00001 K00430 - gmx:100816580 404.445