Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211673g00020 ATGGAAATAACATATGAAAGAAACACACCACCATCATCATCTTCCTCAACTGCACTTCATCATCATATTGGGCTGTGTTTATCAGATCTGATATTATCATCATCACCTGGCTCAAACACCTTGGACTCAATCTTCTCTCACTGTCCTCCTCCCACTGATTCCACAGTGGGCTTCCACTTCCACCAACCTCTCGGGTGGTGCTCCTCCGTGTACACCCGCCAAAGATACATCCTCCAGAAGCTGTACGAGGAAACCCGAATGATGAAGGCTAATTCTTTTGCCGTTGCCCCTTCTTCAAGAAATCCATGGAAGAAGAAGAAGATATATAGGGGAGTGAGGCAGAGGAGCAAGGAAAAATGGGTGGCAGAGATTCGTCTCCCTCAGGAGAGAATGAGGGTTTGGCTTGGCACTTACGACACTCCAGAAGCTGCTGCTTATGCTTATGACCGCGCTGCTTATAAGCTTCGCGGCGAGTATGCGCGCTTGAATTTCCCAGCTTTGAAGGAGCCCTCCTCCAGTAGTGAAGTGCTCTTGTCTTCCCAAGATTCCATCAAGCTTAAATCTTTGAAGTGCTACGTGGATGCTAAGATTCATGGCATATGCGAAAGGCTCACGAGAGAGAGGAGCATGCGCAATAATAATAACAAGAGTGCTCTCAAGAAGAAGAAGCTTGCTTCTCAAGAAAGAGGGGAGTTTGTTGTTGCAGCAGAAGAGGATGGTGTTTTAACAGAGTGTTGTTGGCCAACAATGACAAGAACAATGACAGATATTGAATCATCGTCATCATCATCATCATCTGATGATTTCCAAAATTATTCCTTAGCAAGAGTGCCCTCCTTCGATCCTGACTTGATTTGGGAAGTTCTTGCTAACTAA 876 0.4555 MEITYERNTPPSSSSSTALHHHIGLCLSDLILSSSPGSNTLDSIFSHCPPPTDSTVGFHFHQPLGWCSSVYTRQRYILQKLYEETRMMKANSFAVAPSSRNPWKKKKIYRGVRQRSKEKWVAEIRLPQERMRVWLGTYDTPEAAAYAYDRAAYKLRGEYARLNFPALKEPSSSSEVLLSSQDSIKLKSLKCYVDAKIHGICERLTRERSMRNNNNKSALKKKKLASQERGEFVVAAEEDGVLTECCWPTMTRTMTDIESSSSSSSSDDFQNYSLARVPSFDPDLIWEVLAN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211673g00020 291 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Stsc211673g00020 291 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Stsc211673g00020 291 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
Stsc211673g00020 291 FunFam Ethylene-responsive transcription factor 2 107 166 - -
Stsc211673g00020 291 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Stsc211673g00020 291 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Stsc211673g00020 291 CDD AP2 107 167 IPR001471 GO:0003700|GO:0006355
Stsc211673g00020 291 Gene3D AP2/ERF domain 108 166 IPR036955 GO:0003700|GO:0006355
Stsc211673g00020 291 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 34 289 - -
Stsc211673g00020 291 SMART rav1_2 108 171 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211673g00020 Stsc-Chr211673 58901 59776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211673g00020 23 291 AP2-EREBP Transcription Factor Family AT1G64380 42.154 1.21e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Stsc211673g00020 AP2 6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211673g00020 - - adu:107479760 314.694