Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211671g00004 ATGTCTTCCGAGGATGGAATGCCTAAGCAGGAAGCACAAGGGTTTTCCAGCAGCAGCATTCCTCCCAAGCTAGATGTCTACATTTGGGACATGGATGAGACCCTTATACTGCTCAACTCCTTGCTGAAATCATCATATGCCGAGGGTTTCAATGGTCTCAAGGATACACAGAAAGGTGTGGAAATCGGGAAGATGTGGGAGAATCTCATTCTACAGTTGTGTGATGACTATTTCTTCTATGAACAAATAGAAAATCTAAATTACCATACACCATTTCTTGATGCTCTGGCCCAGTATGATGATGGGAGAGACCTATCTAATTATGATTTTAACCAAGACGAGTTGGGTCCTCCGCATGATGATGGCAACAAAAGAAAACTTGCCTATAGACATCGAGTCATAGCACAAAAGTACTTACAGGGTTTGCATAATATTTTAGATCATGAGATGCTGAAACTCTGGGATGAATTGTATGATAAAACTGATGAATATACTGACAGATGGCTGTCTTCAGCACGGAGCTTTTTAAAGGATTGTTCAGGGGAAAACAAAGATTTGGTTTCTTCCATCGCTTTCTCGAACGTAGTATCTAACACAACCAATGCAAAGCATCAACATATAAATGTTTTAGTGACATCTGGAGGTTTAATACCCTCTCTTGTCAAATGCTTGCTCTTTCGTCTCGACAGCTTAATAACACATGGAAATGTTTATAGCTCTTGTGTAGTGGGGAAAACTCAATGTTTCCAATGGATCAAGGAGCGTTTCAACCGTCCAAATGTCCGCTTTTGTGTGATTGGAGATGGATGGGAAGAGTGTCAAGCTGCGGAAATCATGAGGTGGCCATTTATTAGGATTGACCCGCGGCCAGACAAACTTCATAGGTTCCCTGGTCTCTCATTGACAACAGTTGGCCACTATTTCGCAGTGGTATACGGAAGCCCAAATGATGAGAATGGTGAAGAATGA 969 0.418 MSSEDGMPKQEAQGFSSSSIPPKLDVYIWDMDETLILLNSLLKSSYAEGFNGLKDTQKGVEIGKMWENLILQLCDDYFFYEQIENLNYHTPFLDALAQYDDGRDLSNYDFNQDELGPPHDDGNKRKLAYRHRVIAQKYLQGLHNILDHEMLKLWDELYDKTDEYTDRWLSSARSFLKDCSGENKDLVSSIAFSNVVSNTTNAKHQHINVLVTSGGLIPSLVKCLLFRLDSLITHGNVYSSCVVGKTQCFQWIKERFNRPNVRFCVIGDGWEECQAAEIMRWPFIRIDPRPDKLHRFPGLSLTTVGHYFAVVYGSPNDENGEE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211671g00004 322 FunFam Eyes absent homolog 25 296 - -
Stsc211671g00004 322 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 24 288 - -
Stsc211671g00004 322 SFLD Haloacid Dehalogenase 24 288 - -
Stsc211671g00004 322 NCBIfam EYA conserved domain 25 304 IPR006545 GO:0007275
Stsc211671g00004 322 PANTHER EYES ABSENT 18 308 IPR028472 GO:0004725
Stsc211671g00004 322 Gene3D - 25 297 IPR038102 -
Stsc211671g00004 322 SUPERFAMILY HAD-like 23 290 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211671g00004 Stsc-Chr211671 54171 60260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211671g00004 24 322 Protein tyrosine phosphatase (PTP) family AT2G35320 60.133 6.01e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211671g00004 - - gmx:100791661 542.732