Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211670g00003 ATGGCTAGAGCCCTGCTTATGGACCCCAAAATTCTCCTCCTGGATGAAACCACCAGTGCCTTAGATGCCGAAAGTGAGCACCTAATGAAGGATGCCATAGATTTTTTAATGAAGGGAAAAATTGTTCTAATCATTGCTCATAGATTATCAACCGTCAAAACAGTCAATACTGTAGCGGTTATCTCCGATGGCCAAGTAATTAAGAGTGGCACGCACGACGAGCTTCTCAACAAGAATGGTGTCTATATACTACATTAG 258 0.4225 MARALLMDPKILLLDETTSALDAESEHLMKDAIDFLMKGKIVLIIAHRLSTVKTVNTVAVISDGQVIKSGTHDELLNKNGVYILH 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211670g00003 85 Gene3D - 1 84 IPR027417 -
Stsc211670g00003 85 PANTHER ABC TRANSPORTER B FAMILY 2 82 IPR039421 -
Stsc211670g00003 85 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 83 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211670g00003 Stsc-Chr211670 42452 43379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211670g00003 1 82 Calmodulin-binding Proteins AT2G36910 58.333 7.85e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211670g00003 - - nta:107815260 132.494