Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211669g00010 ATGGAGCTATTTCCTTCTTCTCCAAAAAAATATGATGTTTTTTTACCTCCGAACCCCGGAGATGCGATATGGCCGCCGCTTCGCGAGGCCATTGAGAACTCCAATGTAGCCCTTGTGATCTTTACAAAGGGCTACGCGTCTTCCAAATGGTGTTTGGAGGAACTCGTGAAGATACTGGAGTGGCGAAGAAGGGAGGGAATGGTGGTTATACCTCTGTTTTACAATGTTGATCCTTGTGATGTAAGGAATCAGAGTGGGACATACGGAGAAGCATTTGCAAAACATGAACGGTGCTTCTTGTTGGATGGAAAAGGCAAGAAAGAAAAAGAAGATGGTGAGAAGAAACTGTGTCAATGGAAAGCTGCACTCACCGAAGCTGCTAATATATCTGGATGGTACACTCGATACAATATGAACGCATCTGAAGTCATTGACAAAATGGTCGGAGATGTATTGAAAGTGCTGGAGTTAAGGTTCCCTGAGGAACTAAAATGCAGAGACCTTGTTGGACTTGACAAAATCCTCAGAGAGATGCAATTGTTGCTGTCAAAAGACACTGGTAACAATTCCTTACTTGGAAATCTTCAAGTACTTGGAATTTGCGGTATGAGCGGAATAGGTAAAACAACCATCTCAAAAATCCTTTTCTCCCAACACTTTCCCTTGTATGACAGTGTATGCTTCTTAGAAAATGTGAAAGAAGCATCACAAAACATAGAATCTTTACAAGAGAGGATGGTTTCTGAGCTACTAAAGGATAAAAACCAAAACTCTAGAAAGGTTTTTGTTGTACTTGATGATGTGGATAATGTAGAACAATTACAAGTGTTATGTGAAGAGTTTAGATATGTGAGTCCAGAGAGTAAACTCATTATAACCACAAGAAATAAGGATTTGCTTAGGGGAATAATGGTTGATGAAGAACATGTCTATGAGGTTAAGCCATGGAGCTTTGAAGAATCTCTAGAGCTTTTTTGCTTGAGTGCCTTCAAGAGCAAGCATCCCAAGAAAGGATACAAGGATCTCGCGAAAAGGGCGGTTGATTATACCGGTGGTGTTCCGTTGGCTTTGAAGGTTTTGGGTTCGAGTCTCGCCTACAGAAGCTATGAATCTTGGAAGAGCGAATTGGATAAATTCGAGAACTATTCTTGTGACGGGATTCAGAAGGTGTTGCGAGTAAGCTTTGAAGGACTACATGATCTAGAGAAGAAAATATTTCTAGACATTGCATTCTTCTTCAAAGATGAGTGTAAAGATTTTGTGGAAAGGGTATTGAATGCTTGCGGTTTCTATGCTACCGATGGATTGAAAGCTCTTCAAGATAAAGCTCTCATAACCATTTCCAATGGCAACAAAATAAAAATGCACGATTTGGTTCAAGATTTCGGTTTGCGCATCCAAGATCCTGGAAAACTTAGCCGATTGAGGGACATTGATGAAATTTCTAATGTTCTTGAATGCAAAAATAAGGGGAGTGATGCAGTCGAAGGTATAAAGTTAGATCTGTCACAAATTGACGATCTAGAGTTAAATGCTAACGCATTTAGCGTGATGAATGCTCTAAGATTTTTGAAATTGCATATACCCTGTGGTAGGATTTCCGGTAACATGGACTATCCTCTAATCCTTAATCAATTTTCTTCCGAGTTGAGGTATCTTGAGTGGAATGGATACCGCTTGATCTCTCTTCCAGAAAGTTTTTGTGCTGCGAAACTCGTCGAAATTCGCATGGTCCAGAGTCACATAACAGAGCTTTGGCATGGTGTTAAGGATCTTGTGAACTTAGAGGGAATTGATTTAAGTGAGTGCAAATATTTAGAGAATCTTCCAGATCTGTCCAAGGCATCTAAACTGAAATGGTTGTACCTTTCTGATTGTGAGAGCTTGGTTGAGCTTCATCCATCTCTTTTGTCTCTTGACACGCTTGAAACTTTGAACTTCAATGGCTGCAAGAAGCTCAAGAGTTTAAAGAGTGAGAAGCATTTCAGATCTCTCAAGAAAGTCAGTGTGGAGGGCTGCATCAGTCTCAAGGAGTTCGCGCTCTCGTCCGATGCCATGGAGAGCTTGGAATTGAAGAATGCAGGAATAGAACAGCTGCACTCGTCGATAGGGCGTTCGAGCAACCTCAGACATCTGAATCTAGAAGGTTTGAGACTCCGGAATCTTCCAGATGAGTTATCATCCCTTACAAGCCTTGTGGAACTAAGAATCTCCGATTGCAAAGAGCTAGTTCTTGAAAAACAGAAATTGCAAACATTGTTTGAAGGCCTAAGATCATCTCTAACGTTGCTGCATTTGAAGGATTGTTCAAACTTGCATGAACTTCCTGAAAACGTTAGCGTCTTGAACAAGTTACGTGAGCTGAGACTAGATGGAAGCGCCGTAGAAACATTGCCTGAAAGCATCAAGCATCTTTTGCAGCTCGAAATTCTCTCCTTAGAGAGTTGCTTGAGCCTCAAGCAACTTCCAGAGCTTCCAACAAGCATCAAAGAACTCGCAGCTGCTAACTGCGAGTCCTTGGTGACAGTTTCCACTCTGAAGACTCTTGCAACGGCGATGACAGGGCGAGAGAAGTCTGTCTCGTTTGAGAATTGCACCAAACTAGACGGATCTTCTCTCGTCCGGATCGCGGAAGGTGCAGAGTTATCATCCATGAACGCTGCTTTTCAAAACTTGTTTGTTAGAAGCAACGGCGCCAGCGGTGACAGCTGTCATAACTATAATTTCGTGAAGGTTTGTTCACCTGGAAGCAGAGTCCCGGAGCAGTTCACGTACCGGAGCAGAGAATCCTCTTTCAAAGTCAAAATTCCTTCGCATTCCAACATTTTGGGAATGGTTTTGTGCACAGTTGTTTCGCCGAGCGAAGGGATCAAGAACCATGGTGCGAGCATCTTGTGTCAGTGCTATGATGGTGATGGTAGAAAGGTGGGGTATGCAAGTAGGTGGTGCCATGAAGAAGCTAGCAAGGATTTGAATGGTGATCATGTTTTTGTTTGGTATGATGCACTTCATTTTGATAGCATTGTTAGAAGCCTTGAAGAAGAAGAAATAACTTTTGAGTTCTTTGTTACAAATGAATTGGGGGAACGTGATGTTGTTCCCAAGGAGTGTGGGGTGCGCTTGATTTTTGAGTCAGAGTTGCAGAATCTTTTGAGGAATTTGGATTTGGATCTTGAGTCAAAGTGGAAGTTAGGGTTGGCGCTAGCTTCGGAGTTGGGGTCGGAGCTAAGGTTAAGGTTGGAGTTGGAGTCACAACAGCATAGAGCAATGTCAATGGCAATTGAGAGATTTGGTTTCGATGAGAATAAAAGAAAGGGGATATACAATATGAAGATATTCTCGCTGAAAGATATGATTGTTTCCATGACTTCTTCGGCTGCTGTGAGTACCTAA 3393 0.4212 MELFPSSPKKYDVFLPPNPGDAIWPPLREAIENSNVALVIFTKGYASSKWCLEELVKILEWRRREGMVVIPLFYNVDPCDVRNQSGTYGEAFAKHERCFLLDGKGKKEKEDGEKKLCQWKAALTEAANISGWYTRYNMNASEVIDKMVGDVLKVLELRFPEELKCRDLVGLDKILREMQLLLSKDTGNNSLLGNLQVLGICGMSGIGKTTISKILFSQHFPLYDSVCFLENVKEASQNIESLQERMVSELLKDKNQNSRKVFVVLDDVDNVEQLQVLCEEFRYVSPESKLIITTRNKDLLRGIMVDEEHVYEVKPWSFEESLELFCLSAFKSKHPKKGYKDLAKRAVDYTGGVPLALKVLGSSLAYRSYESWKSELDKFENYSCDGIQKVLRVSFEGLHDLEKKIFLDIAFFFKDECKDFVERVLNACGFYATDGLKALQDKALITISNGNKIKMHDLVQDFGLRIQDPGKLSRLRDIDEISNVLECKNKGSDAVEGIKLDLSQIDDLELNANAFSVMNALRFLKLHIPCGRISGNMDYPLILNQFSSELRYLEWNGYRLISLPESFCAAKLVEIRMVQSHITELWHGVKDLVNLEGIDLSECKYLENLPDLSKASKLKWLYLSDCESLVELHPSLLSLDTLETLNFNGCKKLKSLKSEKHFRSLKKVSVEGCISLKEFALSSDAMESLELKNAGIEQLHSSIGRSSNLRHLNLEGLRLRNLPDELSSLTSLVELRISDCKELVLEKQKLQTLFEGLRSSLTLLHLKDCSNLHELPENVSVLNKLRELRLDGSAVETLPESIKHLLQLEILSLESCLSLKQLPELPTSIKELAAANCESLVTVSTLKTLATAMTGREKSVSFENCTKLDGSSLVRIAEGAELSSMNAAFQNLFVRSNGASGDSCHNYNFVKVCSPGSRVPEQFTYRSRESSFKVKIPSHSNILGMVLCTVVSPSEGIKNHGASILCQCYDGDGRKVGYASRWCHEEASKDLNGDHVFVWYDALHFDSIVRSLEEEEITFEFFVTNELGERDVVPKECGVRLIFESELQNLLRNLDLDLESKWKLGLALASELGSELRLRLELESQQHRAMSMAIERFGFDENKRKGIYNMKIFSLKDMIVSMTSSAAVST 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211669g00010 1130 Gene3D Ribonuclease Inhibitor 685 876 IPR032675 -
Stsc211669g00010 1130 Gene3D Ribonuclease Inhibitor 480 684 IPR032675 -
Stsc211669g00010 1130 Coils Coil 225 252 - -
Stsc211669g00010 1130 Gene3D - 157 310 IPR027417 -
Stsc211669g00010 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 679 IPR044974 GO:0006952
Stsc211669g00010 1130 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 132 IPR035897 -
Stsc211669g00010 1130 Pfam TIR domain 9 169 IPR000157 GO:0007165
Stsc211669g00010 1130 Gene3D - 317 399 IPR042197 -
Stsc211669g00010 1130 ProSiteProfiles TIR domain profile. 1 155 IPR000157 GO:0007165
Stsc211669g00010 1130 SUPERFAMILY L domain-like 455 824 - -
Stsc211669g00010 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 409 IPR027417 -
Stsc211669g00010 1130 Gene3D - 10 156 IPR035897 -
Stsc211669g00010 1130 Pfam C-JID domain 915 1047 IPR045344 -
Stsc211669g00010 1130 Pfam NB-ARC domain 193 390 IPR002182 GO:0043531
Stsc211669g00010 1130 PRINTS Disease resistance protein signature 590 606 - -
Stsc211669g00010 1130 PRINTS Disease resistance protein signature 350 364 - -
Stsc211669g00010 1130 PRINTS Disease resistance protein signature 255 269 - -
Stsc211669g00010 1130 PRINTS Disease resistance protein signature 197 212 - -
Stsc211669g00010 1130 SMART till_3 10 129 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211669g00010 Stsc-Chr211669 55785 60585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211669g00010 706 843 WRKY Transcription Factor Family AT4G12020 29.496 1.07e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211669g00010 - - ahf:112709325 1783.46