Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211669g00008 ATGAATTCTTCAGAGAAGGAGGTAGTACAAGAAAGGCATAATAAGGATAATAATGATGAAGAAGTTGAAGTAGAAGACGAAGAAGAAGCACAGGATGATCATCATGAAACTAAAAAGTCATATGATTGCATATTTTGTAGGAGAGGCTTCACAAATGCTCAAGCTTTAGGGGGTCACATGAATATTCACAGAAAAGATAGGGCTAAGAACAAGAATCATCTTCTTCACTCCTCAAATTCCTCAAACACAAGCAATAATAATCATCAAGAGGCAGAATTCATGGCCCTAAAATTCTCATCATCATCATCAAGCCATACTTACTCTTATTCCTCTTTTGATTCTCAAAGGAACTATGGTGATGATATGTATTTTCATCCACCACCAGCACCAGCACCGGCACCTTATAATTATGTAATTAGGAACCAGCCGCCATTTCAATTAGACCAATTTCATGGATCAATGATGATGATGTCTCAGCCTATGATGGTGAATCTCAGGAACCAAGAACTTCAAGGTGTCAATTTGAGTCTCCAAATTTGCCCTACTTCTGGTGATGAAGAACATGTTTCTAGAAGAAGAAATCAGCAGAAAGATAGTGATGAAGTGGACTTGGAACTCAGACTTGGCCACCATCATCCTTAA 642 0.3816 MNSSEKEVVQERHNKDNNDEEVEVEDEEEAQDDHHETKKSYDCIFCRRGFTNAQALGGHMNIHRKDRAKNKNHLLHSSNSSNTSNNNHQEAEFMALKFSSSSSSHTYSYSSFDSQRNYGDDMYFHPPPAPAPAPYNYVIRNQPPFQLDQFHGSMMMMSQPMMVNLRNQELQGVNLSLQICPTSGDEEHVSRRRNQQKDSDEVDLELRLGHHHP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211669g00008 213 Gene3D Classic Zinc Finger 23 104 - -
Stsc211669g00008 213 PANTHER OS07G0101800 PROTEIN 24 211 - -
Stsc211669g00008 213 MobiDBLite consensus disorder prediction 185 213 - -
Stsc211669g00008 213 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Stsc211669g00008 213 MobiDBLite consensus disorder prediction 1 38 - -
Stsc211669g00008 213 SUPERFAMILY beta-beta-alpha zinc fingers 38 67 IPR036236 -
Stsc211669g00008 213 Coils Coil 10 30 - -
Stsc211669g00008 213 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Stsc211669g00008 213 MobiDBLite consensus disorder prediction 184 213 - -
Stsc211669g00008 213 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211669g00008 Stsc-Chr211669 46372 47403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211669g00008 32 75 C2H2 Transcription Factor Family AT3G09290 63.636 7.34e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211669g00008 - - aip:107615854 224.172