Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211667g00001 ATGGGAAGGAAGTGCTCTCATTGTGGCAACATTGGCCACAATTCAAGAACCTGCACTTCTTCTTCTTCTTCCTTCTCTTCAGGAATCCGTCTCTTCGGGACCCACCTCCTTGCAGACCCTTCCTCTTCCTCTTCCTCATCCTCCATGATTGTAATGAACAAGAAATGCTTCAGCATGGACTCACTAACATTATTCCCCACCACCACCACTACTACTACTACTTCTTCAATTGGTTATGTATCAGATAATAATGCAGCTCCATCTCAAGACAGGAAGAAAGGGGCAACATGGACAGAGGAGGAGCACAGGAGATTCTTGGTTGGGCTTGAGAAGCTGGGAAAGGGGGATTGGAGGGGAATTTCTAGAAGCTTCGTACCCACAAGAACCCCCACCCAAGTGGCCAGCCATGCTCAGAAGTATTTCCTCCGCCTTTCTAACATAAACCACAACAAACGCCGTCCAAGTCTCTTTGACACAAACACATCTACATCTACATTTCCCTCATTGCACTTTCTTGAACAACAAACCAGCAATAATAAGGCATTCATGTTATTATTATCGCCAGAAACTACTACTTCTGAATCATCATCATCCTCATCCTCTATGCATGAAGAACCTCCTATGCCTACTATGTCTTCTATGTGCCTAAACAGACACCGCATCATGAAATCTTCAAATAATAGTGCTGTGCCACCGCCTGATCTGACCCTCACTCTTGCAACACCGCCACCCGCCGCCACCTAA 744 0.4597 MGRKCSHCGNIGHNSRTCTSSSSSFSSGIRLFGTHLLADPSSSSSSSSMIVMNKKCFSMDSLTLFPTTTTTTTTSSIGYVSDNNAAPSQDRKKGATWTEEEHRRFLVGLEKLGKGDWRGISRSFVPTRTPTQVASHAQKYFLRLSNINHNKRRPSLFDTNTSTSTFPSLHFLEQQTSNNKAFMLLLSPETTTSESSSSSSSMHEEPPMPTMSSMCLNRHRIMKSSNNSAVPPPDLTLTLATPPPAAT 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211667g00001 247 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Stsc211667g00001 247 FunFam transcription factor MYB1R1 95 146 - -
Stsc211667g00001 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
Stsc211667g00001 247 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Stsc211667g00001 247 Gene3D - 95 148 - -
Stsc211667g00001 247 MobiDBLite consensus disorder prediction 188 207 - -
Stsc211667g00001 247 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Stsc211667g00001 247 SMART sant 93 143 IPR001005 -
Stsc211667g00001 247 SUPERFAMILY Homeodomain-like 91 146 IPR009057 -
Stsc211667g00001 247 MobiDBLite consensus disorder prediction 217 234 - -
Stsc211667g00001 247 PANTHER TRANSCRIPTION FACTOR KUA1 3 214 - -
Stsc211667g00001 247 CDD SANT 96 141 IPR001005 -
Stsc211667g00001 247 MobiDBLite consensus disorder prediction 188 247 - -
Stsc211667g00001 247 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211667g00001 Stsc-Chr211667 204 1366 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc211667g00001 Myb_DNA-binding 7.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211667g00001 - - adu:107479628 239.965