Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211665g00004 ATGCTACCACAAGCATTAGCTATAGTCCCTGCACCAATTCTTCTTCTTGTGATATTCACATTCATCATTATTTTCCTATCACCATTATTTGTGTTGAAACCTGCAGCAAAACCTCAACATAACAATGGAAGTAGTAAAAAACACCCACCACCAGGTCCAAAGCCATTACCAATTATTGGTAACCTTCACATGTTAGGAAAATTCCCACACCGTACCCTTCAGGCCCTTGCCACTAAATATGGGCCCATAATGTCCCTCAAGTTAGGACAAGTTTCCGCACTTGTGGTTTCTTCTCCGGAAGTTGCTCAGCTCTTTTTCAAAACCCATGACTTGATTTTTGCAAATCGTCCTAAGCTTCAGGTAGTGGAGACTCTTTCTTATGGTCGAAAGGGGTTGGTGTTTACAGAGTATGGTGGTTATTGGCGAAATGTGAGGAAGTTGTGCATCATGCAACTTCTAAGTGCATCCAAGATTGAGATGTTTCATCCTTTGAGAGAAAAGGAGTTGGGATTATTGGTGAATGCACTGAAGAAGGCTTCGAGTTCACGTGAAGTTGTGGATCTCAGTGATTTGATTGGGGAGGTTGTTGAGAATATTACTTGTAACATTATATTGGGTTGTAACAAGGACGATAGGTTTGACATCAAGGGGCTTATTCATGAGATTTTGCACTTGATAGGTCTTTTCAATCTTGCGGATTTTGTGCCTATCTTAGCTTCATTTGATCTTCAGGGGCTAAAGAGAAGAGCAAAGAAAGCAAGCAAGGCCATTGGTGAAGCATTGGAGCAGATCATCAACGATCACGAACACCCTTCATCAATTGAATCCCCAGAGCATAAGGATTTCATAGACATATTACTCAGCTACATGAATCAACCCATGGATCCACATGATCATGAAGAAAGACACATAGTTGGGAGAACCAATATAAAGGCCATCGTATTGGATTTAATTGCTGGAGCATACGACACTTCTAAAGTTACAATCGAATGGGGTATGTCAGAGCTCATAAAAAATCCAAGAACATTGAAGAAACTTCAAGACGAGATTGAAGCCCTTGTGGGAATACATAGACAAGTGGAAGAAAAAGACTTAGAAAAATTGCCTTATCTTGACATGGTTGTGAAGGAGATATTACGATTATACCCTGTTGCGCCATTGCTTGTGCCACACGAGTCTTTAGAAGATGTTACCATAAATGGTTATTTCATAGAGAAAAATACACGGATCATGGTGAATGTGTGGGCCATAGGAAGAGATCCAAGAATATGGTCAGAAAATAGTGCCATGTTTTTTCCTGAAAGATTTGAGGATAATGATGTTGATGTTAAGGGGCATGATTTTAGACTTATACCATTTGGGTCAGGTCGGAGAGGGTGTCCTGGGATAAATATGGGTTTAACCACCGTTAAGATTATTTTAGCACAAATGGTGCATTGTTTTAGTTGGGAACTTCCATTGGGTATGTCTCCAGAGGATTTAGATATGACTGAAGAATTTGGACTTTCTATACCAAGACGTAAGCACTTACTTGCTAGCCCAACTTATCGCTTACATACCAAGCTTGATTAG 1572 0.4014 MLPQALAIVPAPILLLVIFTFIIIFLSPLFVLKPAAKPQHNNGSSKKHPPPGPKPLPIIGNLHMLGKFPHRTLQALATKYGPIMSLKLGQVSALVVSSPEVAQLFFKTHDLIFANRPKLQVVETLSYGRKGLVFTEYGGYWRNVRKLCIMQLLSASKIEMFHPLREKELGLLVNALKKASSSREVVDLSDLIGEVVENITCNIILGCNKDDRFDIKGLIHEILHLIGLFNLADFVPILASFDLQGLKRRAKKASKAIGEALEQIINDHEHPSSIESPEHKDFIDILLSYMNQPMDPHDHEERHIVGRTNIKAIVLDLIAGAYDTSKVTIEWGMSELIKNPRTLKKLQDEIEALVGIHRQVEEKDLEKLPYLDMVVKEILRLYPVAPLLVPHESLEDVTINGYFIEKNTRIMVNVWAIGRDPRIWSENSAMFFPERFEDNDVDVKGHDFRLIPFGSGRRGCPGINMGLTTVKIILAQMVHCFSWELPLGMSPEDLDMTEEFGLSIPRRKHLLASPTYRLHTKLD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211665g00004 523 Gene3D Cytochrome P450 40 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 Coils Coil 343 363 - -
Stsc211665g00004 523 CDD CYP71-like 79 510 - -
Stsc211665g00004 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Stsc211665g00004 523 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 Coils Coil 243 263 - -
Stsc211665g00004 523 Pfam Cytochrome P450 50 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 SUPERFAMILY Cytochrome P450 50 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 FunFam Cytochrome P450 83B1 37 513 - -
Stsc211665g00004 523 PANTHER CYTOCHROME P450 93A3-LIKE 36 519 - -
Stsc211665g00004 523 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00004 523 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211665g00004 Stsc-Chr211665 21717 24541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211665g00004 50 518 Cytochrome P450 AT5G57260 40.412 2.44e-126 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211665g00004 - - adu:107490427 795.038