Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211665g00003 ATGTTACCACAAATATTAGCTATCCCAGCAGCAATTTTCCTTGTGATATTCACATTCATAATATTTCTAAAGCCTCAACATAACAATTGGAATAGCACTAAAAGACTACCACCAGGTCCAAAGCCTTTACCAATCATTGGTAACCTTCATATGTTAGGAAAACTCCCACACCGCACCCTTCAGGCCCTTGCAACCAAATATGGACCCATAATGTCCCTAAAGCTAGGACAAGTCCCTGCTGTTGTGGTTTCTTCTCCAGAATTTGCTGAACTCTTCTTGAAATCTCATGACATGGTTTTTGCAAGCCGGCCTAAACTTCAGTTAGTGGAGATTACTGTTGCCAGAAAGGGGTTGGCATTTAGGGAGTACGGTGGTTATTGGCGCAACGTGAGGAAGTTGTGCACCATGCAACTTCTAAGTGCATCCAAGATTGAGATGTTTGGTCCTCTGAGGAAGAAGGAGTTGGGATTGTTGGTGAATAAACTTAAGAAGGCTTCAGATTCACGTGATGTTGTGGATCTCAGTGATTTGATTAGTGAGGTTGTTGAGAATATTACTTATAACATGATATTGGGTCGTAGCAAAGATGACAGGTTTGACATCAAGGGCGTTATTCATGAGATTATGAACTTGCTTGGTACTTTCAATGTTGGAGATTATAGACTAAAGAGAAGAGCAATGAAAGCATTCAAGGCTGTTGATGAAGCATTGGATCAGATCATCAACGATCACGAACACCCTTCATCAATTGAATCCCCACAAAGTAATAAGGATTTCATAGACATGTTACTCGGCTATATGAATCAACCAATGGACCCACATGATCATGAAGAAAGACACATAGTTGGAAGAGCCAATATAAAGGCGATCGTATTGGATATGATTGCTGGAGCCTTCGACACTTCCAGAACCGCAATTGAATGGGGAATGTCAGAGCTCATAAAATATCCAAGAACAATGAACAAAATTCAAAACGAGATTGAAGCCCTCGTGGGAATACATAGACAAGTGGAAGAAAAAGACTTAGAAAAATTGCCTTATCTTGACATGGTTGTGAAGGAGATATTACGATTATACCCTGTTGCGCCATTGCTTGTGCCACACGAGTCTTTAGAAGATGTTACCATAAATGGTTATTTCATAGAGAAAAACACACGAATCATGGTGAATGCATGGGCCATAGGGAGAGATCCAAGAATTTGGTCGGAAAATTGTAACGAGTTTTTCCCAGAAAGATTTGAGGACAATGATGTCGATGTGAAAGGGCGTGATTTTAGACTCATACCATTTGGGTCAGGTCGAAGAGGGTGTCCTGGAATGAATATGGGTTTAACTACCACTAAGATTGTTTTAGCACAACTAGTGCATTGTTTTAGTTGGGAACTTCCGTTGGGTATCTCTCGAAAGGATTTAGATATGAGTGAGGATTCTGGCCTCACAATACCAAGAAGTAAGCACTTATTAGCTAGGCCAACCTATCGCTTACTTGATGATGAGGCTTAA 1503 0.4059 MLPQILAIPAAIFLVIFTFIIFLKPQHNNWNSTKRLPPGPKPLPIIGNLHMLGKLPHRTLQALATKYGPIMSLKLGQVPAVVVSSPEFAELFLKSHDMVFASRPKLQLVEITVARKGLAFREYGGYWRNVRKLCTMQLLSASKIEMFGPLRKKELGLLVNKLKKASDSRDVVDLSDLISEVVENITYNMILGRSKDDRFDIKGVIHEIMNLLGTFNVGDYRLKRRAMKAFKAVDEALDQIINDHEHPSSIESPQSNKDFIDMLLGYMNQPMDPHDHEERHIVGRANIKAIVLDMIAGAFDTSRTAIEWGMSELIKYPRTMNKIQNEIEALVGIHRQVEEKDLEKLPYLDMVVKEILRLYPVAPLLVPHESLEDVTINGYFIEKNTRIMVNAWAIGRDPRIWSENCNEFFPERFEDNDVDVKGRDFRLIPFGSGRRGCPGMNMGLTTTKIVLAQLVHCFSWELPLGISRKDLDMSEDSGLTIPRSKHLLARPTYRLLDDEA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211665g00003 500 Coils Coil 320 340 - -
Stsc211665g00003 500 CDD CYP71-like 66 487 - -
Stsc211665g00003 500 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 Gene3D Cytochrome P450 27 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PANTHER CYTOCHROME P450 93A3-LIKE 13 495 - -
Stsc211665g00003 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Stsc211665g00003 500 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 FunFam Cytochrome P450 83B1 23 490 - -
Stsc211665g00003 500 SUPERFAMILY Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00003 500 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211665g00003 Stsc-Chr211665 14049 16624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211665g00003 35 496 Cytochrome P450 AT5G57260 38.855 2.01e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211665g00003 - - adu:107490427 762.681