Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211665g00002 ATGTTACCAATCCCAGCATTATGGTTCCTTCTTGGAGGATTCATATTATTCATCCTCTCCACCGCCTTATTATTTCAGAAACAGAGCCAACAAAAACAGAAACAACCACCACCACCACCAGGTCCACCGGGTTTGCCGGTAGTAGGTCACCTCCACATGTTAGGTGAACTTCCCCACCGCAGCCTTGAAACCTTGTCCGAAAAATATGGTCCCATAATGTCTCTAAGACTGGGACAAGTCCCGACCATTGTGATCTCTTCCCCGGAGGTGGCTGAGCTCTGCCTCAAGAAGCATGACACCGATTTCGCCAGCCGGCCTCGCCTCGAAGCTTCGGAGTACTTCTCCTATGGCTACAAGGGCATGATATTCTCCGAGTATAGTCCCTATTGGCGAAACATGAGGAAAGTGTGCACCTTGCAACTTCTTAGTGCATCCAAAGTGGAATCCTTCGCACCTTTGAGGAAGTCGGAGCTCGAAAAAGCGGTTAAAACGGTTGAGAAAGCCGCGGAGGGTGGCGAGGTTGTGAACCTCAGTGAGGTGGTTCATAGCGTTATGGAGGATGTTGTGTATAAAATGGTTTTGGGTTGTAACAAAGATGACAAGTTTGATTTGAAGGGACTTATTCATGAAATGTTGATCTTGGGTGGAAAATTTAATGTTACAGACTTTGTGCCTTGGCTTGGACCATTGGATTTACAGGGACTTAGACGAAACTTCAAGAAGCTTAGTAAAAAACTTGACCAAGTGCTTGAGAAAATAATCAAGGATCATGAACATGCTTCTTCAAATGCTCACAACAACAACAACAACCAGAAACAGATTAACAAGGACTTTGTGGACATATTACTCTCACAAATGCACCAACCCATTGACCCTTACGACGAACAAAATCATGTCATCGATCGCACCAACATAAAGGCTATCGTCTTAGACATGATCGCCGCGGCATTCGACACGTCCGCTACCGTTATCTTATGGGCGTTATCCGAACTCTTAAGGCATCCAAGGGTGATGAAGAAGCTTCAAGAAGAGCTAAGAAATGTGGTTGGAATGAACAAGCTAGTGGAAGAGGTTGATTTCCCAAAGTTGAGTTACTTGGACATGGTGATTAAAGAGACATTAAGATTACATCCAGCAGGAACGTTTATTACCCGAAAATCAACGAAAGACACTGTGATTCATGATTATTACATCAAGAAATCTTCAGAGGTACTTGTAAATTTGTGGGCAATAGGGCGTGATCCTAAGGTATGGTCGAAGAATGCGCTAGAGTTTTATCCAGAGAGATTCTTGAATAAGAATGTGGATGTTCGTGGTTATGACTTTGAGTTGATACCATTTGGTTCTGGTCGAAGAGGGTGTCCTGGCATTCAATTGGGTCTTGTTACGGTTAAACTTGTTGTGTCTCAGTTTGTGCATTGCTTTGATTGGGAACTTCCATATGGTATGAGTCCCAATGAATTAGACATGAGTGAGAAATATGGCATAACAGTCCCAAGAGTCAAGGATTTGCTTGCTGTGCCAACGTCTCGTCCACTTGAAATATGGGCACAAGATGGATGGAACAAGTAA 1572 0.4383 MLPIPALWFLLGGFILFILSTALLFQKQSQQKQKQPPPPPGPPGLPVVGHLHMLGELPHRSLETLSEKYGPIMSLRLGQVPTIVISSPEVAELCLKKHDTDFASRPRLEASEYFSYGYKGMIFSEYSPYWRNMRKVCTLQLLSASKVESFAPLRKSELEKAVKTVEKAAEGGEVVNLSEVVHSVMEDVVYKMVLGCNKDDKFDLKGLIHEMLILGGKFNVTDFVPWLGPLDLQGLRRNFKKLSKKLDQVLEKIIKDHEHASSNAHNNNNNQKQINKDFVDILLSQMHQPIDPYDEQNHVIDRTNIKAIVLDMIAAAFDTSATVILWALSELLRHPRVMKKLQEELRNVVGMNKLVEEVDFPKLSYLDMVIKETLRLHPAGTFITRKSTKDTVIHDYYIKKSSEVLVNLWAIGRDPKVWSKNALEFYPERFLNKNVDVRGYDFELIPFGSGRRGCPGIQLGLVTVKLVVSQFVHCFDWELPYGMSPNELDMSEKYGITVPRVKDLLAVPTSRPLEIWAQDGWNK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211665g00002 523 CDD CYP71-like 68 504 - -
Stsc211665g00002 523 Pfam Cytochrome P450 39 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 Coils Coil 232 252 - -
Stsc211665g00002 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc211665g00002 523 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211665g00002 523 PANTHER CYTOCHROME P450 93A3-LIKE 17 511 - -
Stsc211665g00002 523 FunFam Cytochrome P450 83B1 24 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211665g00002 Stsc-Chr211665 9726 12854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211665g00002 4 509 Cytochrome P450 AT5G57260 38.343 3.06e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211665g00002 - - aprc:113867069 656.751