Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211663g00003 | ATGAGTAGTATTGTAATCTGCGGTAGTAGTGAAGGTAATATTAGTTTATCAGAGAAGAGGGAGAGGGTTTTGAATAAGCTTGTGGAGGGGCATAAACATGCCACTGAGCTTAAGCATCTTCTTCAAAATCAAAATCAGAATCAGAATCAGAATCTTCCACCTACTAGCTCATCAGCTGAGGCACTATTAATAAGCAAGATTCTCAGATCTTTCACGGAGACTCTCTCTGATCTAGATTCTTCTTCTGCTTCACCTAATTTATTAGCTTCCTCCCTTAACAATGATAACAATTATTCGTCCCAGCCAGTTGTTGCTGCAAACTCTTACTCAACCAACAATAACGATCTGAAGTCTGAAGGTTCGAGCGAGAGTAGCAAGAGATCCTCCTCATCAGTCCCTAAGGATCGCAGAGGCACATATAAAAGAAGGAAAACGGAAGAGACATGGAGCAATGTATCTTCCAACACTGATGATGATTGTGCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTAAATTTCCCAGGAGTTATTATAGGTGCACTCGGAAGTTTGATCAAGGTTGCAAAGCAACAAAACAAGTTCAAAGGATTCAAGATGATCCAGTTTTGTATCAAATTACCTACATTGGTCGACACACATGCAAAGAATCTCTCAAAGCTTCACAAATGATGACAACAACAAATCCTTTGAATCCAAAAGATCATCATCAAACCCCACCATCAGCAAATGCTATAATCAAACAAGAGGACACTACTCCAAGCGATGATCTAATCGTTGCAGAAAAATTGGATGGAAACCTTTGGTCTGATTTGAAGGATTTCGAGATAACCAACCCTCCTCCTACTTCTGCTGATAATAACTTTTGGGGTGTTTTCTTCTTATAA | 891 | 0.3962 | MSSIVICGSSEGNISLSEKRERVLNKLVEGHKHATELKHLLQNQNQNQNQNLPPTSSSAEALLISKILRSFTETLSDLDSSSASPNLLASSLNNDNNYSSQPVVAANSYSTNNNDLKSEGSSESSKRSSSSVPKDRRGTYKRRKTEETWSNVSSNTDDDCAWRKYGQKEILNSKFPRSYYRCTRKFDQGCKATKQVQRIQDDPVLYQITYIGRHTCKESLKASQMMTTTNPLNPKDHHQTPPSANAIIKQEDTTPSDDLIVAEKLDGNLWSDLKDFEITNPPPTSADNNFWGVFFL | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211663g00003 | 296 | Pfam | WRKY DNA -binding domain | 157 | 217 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211663g00003 | 296 | SUPERFAMILY | WRKY DNA-binding domain | 155 | 217 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211663g00003 | 296 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 27 | 238 | IPR044810 | GO:0003700 | |
Stsc211663g00003 | 296 | ProSiteProfiles | WRKY domain profile. | 151 | 214 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211663g00003 | 296 | MobiDBLite | consensus disorder prediction | 129 | 148 | - | - | |
Stsc211663g00003 | 296 | Gene3D | WRKY domain | 142 | 218 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211663g00003 | 296 | SMART | WRKY_cls | 156 | 218 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211663g00003 | 296 | MobiDBLite | consensus disorder prediction | 108 | 128 | - | - | |
Stsc211663g00003 | 296 | MobiDBLite | consensus disorder prediction | 108 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211663g00003 | Stsc-Chr211663 | 54895 | 57286 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211663g00003 | 19 | 252 | WRKY Transcription Factor Family | AT3G56400 | 40.081 | 2.85e-44 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc211663g00003 | WRKY | 1.8e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211663g00003 | - | - | adu:107470163 | 352.829 |