Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211663g00003 ATGAGTAGTATTGTAATCTGCGGTAGTAGTGAAGGTAATATTAGTTTATCAGAGAAGAGGGAGAGGGTTTTGAATAAGCTTGTGGAGGGGCATAAACATGCCACTGAGCTTAAGCATCTTCTTCAAAATCAAAATCAGAATCAGAATCAGAATCTTCCACCTACTAGCTCATCAGCTGAGGCACTATTAATAAGCAAGATTCTCAGATCTTTCACGGAGACTCTCTCTGATCTAGATTCTTCTTCTGCTTCACCTAATTTATTAGCTTCCTCCCTTAACAATGATAACAATTATTCGTCCCAGCCAGTTGTTGCTGCAAACTCTTACTCAACCAACAATAACGATCTGAAGTCTGAAGGTTCGAGCGAGAGTAGCAAGAGATCCTCCTCATCAGTCCCTAAGGATCGCAGAGGCACATATAAAAGAAGGAAAACGGAAGAGACATGGAGCAATGTATCTTCCAACACTGATGATGATTGTGCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTAAATTTCCCAGGAGTTATTATAGGTGCACTCGGAAGTTTGATCAAGGTTGCAAAGCAACAAAACAAGTTCAAAGGATTCAAGATGATCCAGTTTTGTATCAAATTACCTACATTGGTCGACACACATGCAAAGAATCTCTCAAAGCTTCACAAATGATGACAACAACAAATCCTTTGAATCCAAAAGATCATCATCAAACCCCACCATCAGCAAATGCTATAATCAAACAAGAGGACACTACTCCAAGCGATGATCTAATCGTTGCAGAAAAATTGGATGGAAACCTTTGGTCTGATTTGAAGGATTTCGAGATAACCAACCCTCCTCCTACTTCTGCTGATAATAACTTTTGGGGTGTTTTCTTCTTATAA 891 0.3962 MSSIVICGSSEGNISLSEKRERVLNKLVEGHKHATELKHLLQNQNQNQNQNLPPTSSSAEALLISKILRSFTETLSDLDSSSASPNLLASSLNNDNNYSSQPVVAANSYSTNNNDLKSEGSSESSKRSSSSVPKDRRGTYKRRKTEETWSNVSSNTDDDCAWRKYGQKEILNSKFPRSYYRCTRKFDQGCKATKQVQRIQDDPVLYQITYIGRHTCKESLKASQMMTTTNPLNPKDHHQTPPSANAIIKQEDTTPSDDLIVAEKLDGNLWSDLKDFEITNPPPTSADNNFWGVFFL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211663g00003 296 Pfam WRKY DNA -binding domain 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211663g00003 296 SUPERFAMILY WRKY DNA-binding domain 155 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211663g00003 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 238 IPR044810 GO:0003700
Stsc211663g00003 296 ProSiteProfiles WRKY domain profile. 151 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211663g00003 296 MobiDBLite consensus disorder prediction 129 148 - -
Stsc211663g00003 296 Gene3D WRKY domain 142 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211663g00003 296 SMART WRKY_cls 156 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211663g00003 296 MobiDBLite consensus disorder prediction 108 128 - -
Stsc211663g00003 296 MobiDBLite consensus disorder prediction 108 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211663g00003 Stsc-Chr211663 54895 57286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211663g00003 19 252 WRKY Transcription Factor Family AT3G56400 40.081 2.85e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211663g00003 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211663g00003 - - adu:107470163 352.829