Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211662g00010 ATGGCTTTGTGGTTTTCGGTTATTAGTTTCAATATTGTTGTGCTTGTGTTGTTGCTATTGGGCAATGAAGGTGTGTGTTCATCAAGTGGTTTGGAGAAGGAGGTGGTGGCAGAGCAAGAAGCTGATAGAGTGTACGGGCTACCGGGGCAGCCGGTGGTGAAGTTCAAGCAATATGCTGGTTACATCACTGTCAATGAGAGTCATGGAAGAGCACTCTTCTACTGGTTCTTTGAGGCTACCCACAAACCGGAAGAAAAACCACTCCTTCTATGGCTCAATGGAGGACCAGGGTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAACTTGGACCCTTCTTCCCCCAAAATAGCAGTGAACCCAAGCTAAAATTGAACCCTTATTCTTGGAACAAAGCCGCAAATCTTTTGTTTTTGGAATCCCCTGCGGGAGTGGGATTCTCCTACACCAACACCAGCAGTGATATTAAGGCTCTTGGTGACACAATTACAGCTATTGATTCTCACATCTTTATCACCAAATGGTTTCAACGATTTCCACAATTTAGATCACACGACTTCTACATTTCAGGCGAAAGCTATGCAGGGCACTATGTTCCACAACTTTCCGAGCTCATATTTGATAACAATCGTGATCCTTCCAAGGAAGACTACATTAAATTCAAAGGATTCATGATTGGGAATGCACTGTTAGACGATGAAACAGATCAAAAGGGAATGGTAGATTATGCTTGGGACCACGCAGTGATATCAGATGGTGTATACCATAACATCACTTCAAATTGTGATTTCAGATTTGCAAATCTAACAGATGAAGGTTTATCAAAGGAATGCAATGATGCACTCAAGAAGTATTTTGATGTTTATAAGATCATTGACATGTACAGCTTATACACTCCAATGTGTTTCACTAACACCAACAGCACCAACACAAGGGAAAGGGATACCCCTAAAGTTGTCAAAGGCGTTGCCCCTCACACTTTCTCTAAATTCGACATGTGGCATCAAATACCAGCAAGTGGATATGATCCTTGTGCATCAGATTACACTGCTGCCTATCTAAATAGGCCAGAAGTGCAAGAAGCATTGCATGCCAATGTCACCAAAATTTCATACAGATGGACTCATTGCAGTGATCAAATCAACACTTGGCAAGGTTCACCTCAGTCAATGCTTCCTATTCTGAAGAAGCTCATTGCTGGTGGTATTAGGGTTTGGGTTTTCAGTGGAGATACTGATGGAAGAATTCCAGTAACTTCCACAAGATTGACACTGAGAAAGTTGGGACTTAGAATTGTTCAAGATTGGACTCCTTGGTATACCAGCAGACAGGTAGGAGGATGGACAATTGAATATGATGGACTCACATTTGTGACAGTAAGAGGTGCTGGTCATCAGGTTCCAACTTTTCGTCCTAAGCAAGCTCTTCAGCTAATAAGACATTTCTTGCTCAACAAGAAATTACCAGAGCAACCAATTAAACAGGGTCCTTTTTAG 1494 0.4217 MALWFSVISFNIVVLVLLLLGNEGVCSSSGLEKEVVAEQEADRVYGLPGQPVVKFKQYAGYITVNESHGRALFYWFFEATHKPEEKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSSEPKLKLNPYSWNKAANLLFLESPAGVGFSYTNTSSDIKALGDTITAIDSHIFITKWFQRFPQFRSHDFYISGESYAGHYVPQLSELIFDNNRDPSKEDYIKFKGFMIGNALLDDETDQKGMVDYAWDHAVISDGVYHNITSNCDFRFANLTDEGLSKECNDALKKYFDVYKIIDMYSLYTPMCFTNTNSTNTRERDTPKVVKGVAPHTFSKFDMWHQIPASGYDPCASDYTAAYLNRPEVQEALHANVTKISYRWTHCSDQINTWQGSPQSMLPILKKLIAGGIRVWVFSGDTDGRIPVTSTRLTLRKLGLRIVQDWTPWYTSRQVGGWTIEYDGLTFVTVRGAGHQVPTFRPKQALQLIRHFLLNKKLPEQPIKQGPF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211662g00010 497 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Stsc211662g00010 497 Gene3D alpha/beta hydrolase 38 303 IPR029058 -
Stsc211662g00010 497 Gene3D - 344 382 - -
Stsc211662g00010 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Stsc211662g00010 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Stsc211662g00010 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Stsc211662g00010 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Stsc211662g00010 497 FunFam Carboxypeptidase 38 303 - -
Stsc211662g00010 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 471 IPR001563 GO:0004185|GO:0006508
Stsc211662g00010 497 Gene3D - 390 483 - -
Stsc211662g00010 497 FunFam Carboxypeptidase 390 484 - -
Stsc211662g00010 497 SUPERFAMILY alpha/beta-Hydrolases 39 487 IPR029058 -
Stsc211662g00010 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 454 471 IPR033124 GO:0004185
Stsc211662g00010 497 Pfam Serine carboxypeptidase 49 483 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211662g00010 Stsc-Chr211662 50370 59998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211662g00010 352 487 Calmodulin-binding Proteins AT2G22960 27.007 1.08e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211662g00010 K16297 - gmx:100781503 771.155