Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211658g00007 | ATGGGAACCTTATGTCTAGTACCTAATTTATCAAAGTATCCAGCCACACATCAACATAACGATCCTTTCATCACTTTGTTCTTCTCCCTCTGCACCCGTCTACCCCTCACCGTCGCAGCGCCGTCCAGCCCACCATCAGCCACTGTCACCACTCACTCCCAAACTCTCTTTCCTCCACTGCAATGCTCACCCACCTCTCCTCCCTCACACCAACCGCGTCACTCTCACCCCCCGCCGCCCCATCCACCACCATCTCCATCCAAATGTAACCGCAAGCCACCACCAGTCGCCCTCAATCTCACTTTTTCCCTCCGCGACCACGAGAGGCGCCGCCGACAGTCCTTCGCGCCTCCACGTTCCAGCCGTCGCGCACTCGTGTCCAGCCCCCGACCTACAGCCTCCGCGTTGCAGACTTTGCGCTCTCCACGGTGCCTCCAGCATCCTGCCACCTTGCCTCGAACATGCCTTTCTCGTGCAAATAGGAAAACGGTTGAGGAAACTGTTGTGAGGGTGAGGATTGGAGTGGGAAACAGTATCTCAGTATCAGTAGGCTACCTTCATATTTTTGGTCTTGGAGGAAACATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGTTTATTTCAGATGCAACACATCAAAGGGGTGTATGTTCACCGAAGAAGCAAGTAGAGAGATGCAGGACAGATGCCTCAATGCTCATAATCACTTACACCTCTACACATAACCACCCTTCTCCTGATGAAATATTCTCCACTGCGTATTTATCACAGAAACCAAAAGAACAAGAAACTGAAGAAGCCACAGAAGAAGACCTCTCAAAGGTCGAAGAACAAGAACATGAACATGTTGAATAA | 861 | 0.5087 | MGTLCLVPNLSKYPATHQHNDPFITLFFSLCTRLPLTVAAPSSPPSATVTTHSQTLFPPLQCSPTSPPSHQPRHSHPPPPHPPPSPSKCNRKPPPVALNLTFSLRDHERRRRQSFAPPRSSRRALVSSPRPTASALQTLRSPRCLQHPATLPRTCLSRANRKTVEETVVRVRIGVGNSISVSVGYLHIFGLGGNMDKSQSKDLHIQGFISDATHQRGVCSPKKQVERCRTDASMLIITYTSTHNHPSPDEIFSTAYLSQKPKEQETEEATEEDLSKVEEQEHEHVE | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 246 | 260 | - | - | |
Stsc211658g00007 | 286 | SUPERFAMILY | WRKY DNA-binding domain | 218 | 248 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 40 | 141 | - | - | |
Stsc211658g00007 | 286 | ProSiteProfiles | WRKY domain profile. | 219 | 248 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211658g00007 | 286 | Pfam | WRKY DNA -binding domain | 214 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 125 | 141 | - | - | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 40 | 60 | - | - | |
Stsc211658g00007 | 286 | SMART | WRKY_cls | 200 | 247 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211658g00007 | 286 | Gene3D | WRKY domain | 202 | 249 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 61 | 91 | - | - | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 246 | 286 | - | - | |
Stsc211658g00007 | 286 | MobiDBLite | consensus disorder prediction | 261 | 286 | - | - | |
Stsc211658g00007 | 286 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 219 | 279 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211658g00007 | Stsc-Chr211658 | 38950 | 41505 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211658g00007 | 219 | 248 | WRKY Transcription Factor Family | AT2G34830 | 73.333 | 5.68e-08 | 51.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc211658g00007 | WRKY | 0.00014 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211658g00007 | - | - | adu:107492378 | 103.605 |