Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211658g00007 ATGGGAACCTTATGTCTAGTACCTAATTTATCAAAGTATCCAGCCACACATCAACATAACGATCCTTTCATCACTTTGTTCTTCTCCCTCTGCACCCGTCTACCCCTCACCGTCGCAGCGCCGTCCAGCCCACCATCAGCCACTGTCACCACTCACTCCCAAACTCTCTTTCCTCCACTGCAATGCTCACCCACCTCTCCTCCCTCACACCAACCGCGTCACTCTCACCCCCCGCCGCCCCATCCACCACCATCTCCATCCAAATGTAACCGCAAGCCACCACCAGTCGCCCTCAATCTCACTTTTTCCCTCCGCGACCACGAGAGGCGCCGCCGACAGTCCTTCGCGCCTCCACGTTCCAGCCGTCGCGCACTCGTGTCCAGCCCCCGACCTACAGCCTCCGCGTTGCAGACTTTGCGCTCTCCACGGTGCCTCCAGCATCCTGCCACCTTGCCTCGAACATGCCTTTCTCGTGCAAATAGGAAAACGGTTGAGGAAACTGTTGTGAGGGTGAGGATTGGAGTGGGAAACAGTATCTCAGTATCAGTAGGCTACCTTCATATTTTTGGTCTTGGAGGAAACATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGTTTATTTCAGATGCAACACATCAAAGGGGTGTATGTTCACCGAAGAAGCAAGTAGAGAGATGCAGGACAGATGCCTCAATGCTCATAATCACTTACACCTCTACACATAACCACCCTTCTCCTGATGAAATATTCTCCACTGCGTATTTATCACAGAAACCAAAAGAACAAGAAACTGAAGAAGCCACAGAAGAAGACCTCTCAAAGGTCGAAGAACAAGAACATGAACATGTTGAATAA 861 0.5087 MGTLCLVPNLSKYPATHQHNDPFITLFFSLCTRLPLTVAAPSSPPSATVTTHSQTLFPPLQCSPTSPPSHQPRHSHPPPPHPPPSPSKCNRKPPPVALNLTFSLRDHERRRRQSFAPPRSSRRALVSSPRPTASALQTLRSPRCLQHPATLPRTCLSRANRKTVEETVVRVRIGVGNSISVSVGYLHIFGLGGNMDKSQSKDLHIQGFISDATHQRGVCSPKKQVERCRTDASMLIITYTSTHNHPSPDEIFSTAYLSQKPKEQETEEATEEDLSKVEEQEHEHVE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 246 260 - -
Stsc211658g00007 286 SUPERFAMILY WRKY DNA-binding domain 218 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 40 141 - -
Stsc211658g00007 286 ProSiteProfiles WRKY domain profile. 219 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211658g00007 286 Pfam WRKY DNA -binding domain 214 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 125 141 - -
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 40 60 - -
Stsc211658g00007 286 SMART WRKY_cls 200 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211658g00007 286 Gene3D WRKY domain 202 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 61 91 - -
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 246 286 - -
Stsc211658g00007 286 MobiDBLite consensus disorder prediction 261 286 - -
Stsc211658g00007 286 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 219 279 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211658g00007 Stsc-Chr211658 38950 41505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211658g00007 219 248 WRKY Transcription Factor Family AT2G34830 73.333 5.68e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211658g00007 WRKY 0.00014 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211658g00007 - - adu:107492378 103.605