Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211658g00002 ATGATTTGGATAGCAATATTTTTAGTCTCTCTTACTTGTCTCTGGCTATGGGGATTCACCAACAAGAACAAGAAACTACCTCCTGGTCCAAGAGGGTTACCAATTTTGGGTAGCCTCCATAAGTTGGGACATAATCCTCATCTTGATCTTCACAAACTAGCACAAAAACATGGACCAATCATGCACCTGCGCCTAGGTTTGGTGCCAACCATTGTTGTCTCTTCTCCACAAGCTGCTGAACTCTTCCTTAAAACTCATGACCTTGTTTTCGCGAGTAGGCCACCCCAAGAAGCAGCAAAGCGCATTTCTTGGGAGCAGAGGAGCTTGAGTTTTGGTGAATATGGTCCTTATTGGCGCAACATGCGCAAGATGTGCACCTTGGAGCTACTAAGCCAAACAAAGATTAACTCATTCAGATGCATGAGGCAAGAGGAGGTTGAACTGTTGATCAAGGCTCTTAGAGATGCATCAAATGATGATGGAGTTGCTGTTGATCTGAGTGCTAAGGTTTCAACACTGAGTGCTGACATGAGTTGTAGAATGGTTTTTGGGAAGAAGTACAATGACAAAGACTTGGATGAAAAGGGTTTCAAGAGTGTTATACAAGAAGGAATGCTTTTATCGGCAACTCCAAACATAGGTGACTATATTCCTTATGTTGGTAAACTTGATCTCCAAGGCTTAACTAGGCGCATGAAGGCTGTGGGAAAAACATTTGATGAGTTTTTTGACAAAGTTATTGATGATCACTTGCAATCATTAGAGAACAGAGAAGACAAAGTAAAGGACTTTGTGGATGTCATGTTGGGATTTCTGGGCACTGAAGAATCTGAATACCGTATTGAACGCCCTAATATCAAAGCCATATTGCTGGATATGTTGGCAGGTTCAATGGATACATCAGCAACAGCAATAGAGTGGGCAATGTCAGAGCTAATAAAGCATCCAAGGGTGATGAAGAAACTTCAAATGGAGTTAGAATCTGTGGTTGGTATGAAGAGAATGGTAGATGAGTCAGACTTGAACAAGTTGGAGTATTTGGACATGGTCATCAAAGAAACCATGAGGATCCATCCAGTGGCACCATTACTAATACCACATGAATCTATGGAAGATTGCATGGTTGGAGAATTCTTCATACCAAAGAAATCGAGAGTGATAATAAATGCATGGGCAATTATGAGGGACCCAAGTGCTTGGAGTGAGCCAGAGAAGTTCTTGCCGGAGAGATTTGAGGGAAGAGATATTGATATTAAAGGCAGAGATTTCCAGTTTATACCATTTGGGTCTGGGAGAAGAGGATGCCCTGGATTGCAGTTAGGTCTAACAGTGGTTCGGTTGATGGTGGCACAACTGGTGCATTGCTTTGATTGGGAATTACCAAATAAGATGTTGGCATCTGAATTGGACATGACTGAGGAGTTTGGTCTCACTATGCCTAGGGCCAATCATTTATTTGCCATCCCAACTTACAGGCTTCATAATGAAACTCGTTAA 1497 0.4208 MIWIAIFLVSLTCLWLWGFTNKNKKLPPGPRGLPILGSLHKLGHNPHLDLHKLAQKHGPIMHLRLGLVPTIVVSSPQAAELFLKTHDLVFASRPPQEAAKRISWEQRSLSFGEYGPYWRNMRKMCTLELLSQTKINSFRCMRQEEVELLIKALRDASNDDGVAVDLSAKVSTLSADMSCRMVFGKKYNDKDLDEKGFKSVIQEGMLLSATPNIGDYIPYVGKLDLQGLTRRMKAVGKTFDEFFDKVIDDHLQSLENREDKVKDFVDVMLGFLGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWAMSELIKHPRVMKKLQMELESVVGMKRMVDESDLNKLEYLDMVIKETMRIHPVAPLLIPHESMEDCMVGEFFIPKKSRVIINAWAIMRDPSAWSEPEKFLPERFEGRDIDIKGRDFQFIPFGSGRRGCPGLQLGLTVVRLMVAQLVHCFDWELPNKMLASELDMTEEFGLTMPRANHLFAIPTYRLHNETR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211658g00002 498 Pfam Cytochrome P450 27 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 SUPERFAMILY Cytochrome P450 27 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Stsc211658g00002 498 FunFam Cytochrome P450 83B1 15 488 - -
Stsc211658g00002 498 PANTHER CYTOCHROME P450 93A3-LIKE 3 494 - -
Stsc211658g00002 498 CDD CYP71-like 56 485 - -
Stsc211658g00002 498 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211658g00002 498 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211658g00002 Stsc-Chr211658 8784 10674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211658g00002 2 490 Cytochrome P450 AT3G26300 39.960 1.69e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211658g00002 K20562 - gmx:100809526 796.193