Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211651g00014 ATGCCTCAGGGAACCCTTGAAGTCCTTCTTGTTAGTGCCAAGAAACTTGAGAACACTGATTATTTTTGTAAAATGGACCCTTTTGTGATCCTCACATGCCGTACTCAGACACAACAAAGCAGCGTTGCATCAAACCAGGGGTCGAATCCAGAGTGGAATGAGACGTTTGTGTTCAACGTGTCTGAAGGAGTGAAAGATATCCAAATGAAGATCATGGACCAAGATATCGGCTCATGTGATGACTTTGTTGGAGAAGTAACCATTCCCCTAGCTGCGGTGTTTGCTGAAGGAAGCGTCCCACCTCATCCTTACACAGTTGTCAAGAATGGCCACTATTGTGGGGAGATTAAACTTGGCCTAAAATTTATGCAAGAGGAACGCCATGATCGGGGTATGGCGGAGGAAAATTTTGGTGGATGGAAGCATTCTGCTGCTTATTACTGA 444 0.4505 MPQGTLEVLLVSAKKLENTDYFCKMDPFVILTCRTQTQQSSVASNQGSNPEWNETFVFNVSEGVKDIQMKIMDQDIGSCDDFVGEVTIPLAAVFAEGSVPPHPYTVVKNGHYCGEIKLGLKFMQEERHDRGMAEENFGGWKHSAAYY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211651g00014 147 PANTHER C2 DOMAIN-CONTAINING 1 126 - -
Stsc211651g00014 147 SMART C2_3c 5 102 IPR000008 -
Stsc211651g00014 147 Pfam C2 domain 4 102 IPR000008 -
Stsc211651g00014 147 Gene3D C2 domain 2 124 IPR035892 -
Stsc211651g00014 147 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Stsc211651g00014 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 124 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211651g00014 Stsc-Chr211651 70479 71403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211651g00014 4 137 C2H2 Transcription Factor Family AT4G21160 25.373 3.80e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211651g00014 - - tcc:18606483 203.756