Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211650g00002 | ATGGAATGGGAAAAATGCGGTGCTGATGTTTGGTTTGTCAAAGATTGGAAGAAATTTGCAGAGTTTTATTCTTTGGAAAATGAGCAGGTTTTGATGTTCAAGTATGAAGGGAAGTCACGGTTCAATGTCATAATACTCGGTCGGAGTTGCTTGGAAAGAGAATACCCTTTGTTGAATGAAACTCTTGAAGCTGAAGACGACTCTATGGAAAGGCCAAACTCTCCGTCGCGATGTTCTTCTAAGAAGAGAAGAACTAACACAAAAGAAGAAGCTAGATTGTATTCTAGTCAACACGGTGAAACCAAAGGTGCTCAATCTCGGTGGCCAAGCACTGAGAAGAAGAAATTCAATGCATATTCTGATACTGGAAGGCCAAAAGACACAGGTGGAAGGAGAATCTTCTCAAAATCTGAGGCTTCTAACAATTTTGAGGCACCAAAAGATACTAAAAGTAGCAGTGCTTTGGAGAGAGCCATGGCTTTGGCTTCTAACAATCTTTGGTTCTATCGCGAAATGAAACCAGCGTACCTCAATAACTATCTTCTGTTCAAGAAAGGAGACTTTATAAAACAAGAAGGAAAAGAGGAGAATTTTCTCAGTCTCTGGGTTACTGATGAGAATAAAACATGGGATGCTAAGATCACAAAGGATGATACTACTGGACAGATAATGCTTACTACTGGTTGGAAGGACTTTGTAGAGGCCAACAACCTGAAACTAAATGATGTTTGCATTTTTGAGAAAACTGGAAATTCCAGAGGACTTTTATATAGAGTTATTATCCACCATGCCAAAGAAGAATCAACCCATATTCCATCTCAAGTTACAAACGACGTGGACGTAGCAGCAATTGGACCGGAGATAATCAATTCACCGTCAAATTAA | 885 | 0.3955 | MEWEKCGADVWFVKDWKKFAEFYSLENEQVLMFKYEGKSRFNVIILGRSCLEREYPLLNETLEAEDDSMERPNSPSRCSSKKRRTNTKEEARLYSSQHGETKGAQSRWPSTEKKKFNAYSDTGRPKDTGGRRIFSKSEASNNFEAPKDTKSSSALERAMALASNNLWFYREMKPAYLNNYLLFKKGDFIKQEGKEENFLSLWVTDENKTWDAKITKDDTTGQIMLTTGWKDFVEANNLKLNDVCIFEKTGNSRGLLYRVIIHHAKEESTHIPSQVTNDVDVAAIGPEIINSPSN | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211650g00002 | 294 | Gene3D | - | 147 | 267 | IPR015300 | - | |
Stsc211650g00002 | 294 | SUPERFAMILY | DNA-binding pseudobarrel domain | 163 | 262 | IPR015300 | - | |
Stsc211650g00002 | 294 | SMART | B3_2 | 168 | 265 | IPR003340 | GO:0003677 | |
Stsc211650g00002 | 294 | Gene3D | - | 1 | 50 | IPR015300 | - | |
Stsc211650g00002 | 294 | ProSiteProfiles | B3 DNA-binding domain profile. | 1 | 49 | IPR003340 | GO:0003677 | |
Stsc211650g00002 | 294 | MobiDBLite | consensus disorder prediction | 63 | 149 | - | - | |
Stsc211650g00002 | 294 | ProSiteProfiles | B3 DNA-binding domain profile. | 206 | 265 | IPR003340 | GO:0003677 | |
Stsc211650g00002 | 294 | MobiDBLite | consensus disorder prediction | 117 | 133 | - | - | |
Stsc211650g00002 | 294 | MobiDBLite | consensus disorder prediction | 82 | 96 | - | - | |
Stsc211650g00002 | 294 | PANTHER | B3 DOMAIN-CONTAINING | 1 | 251 | - | - | |
Stsc211650g00002 | 294 | MobiDBLite | consensus disorder prediction | 98 | 116 | - | - | |
Stsc211650g00002 | 294 | SUPERFAMILY | DNA-binding pseudobarrel domain | 5 | 56 | IPR015300 | - | |
Stsc211650g00002 | 294 | CDD | B3_DNA | 174 | 262 | IPR003340 | GO:0003677 | |
Stsc211650g00002 | 294 | MobiDBLite | consensus disorder prediction | 134 | 149 | - | - | |
Stsc211650g00002 | 294 | Pfam | B3 DNA binding domain | 199 | 254 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211650g00002 | Stsc-Chr211650 | 2576 | 3831 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211650g00002 | 5 | 57 | B3 DNA Binding Superfamily | AT1G49475 | 49.057 | 7.91e-10 | 55.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Stsc211650g00002 | B3 | 6.4e-12 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211650g00002 | - | - | adu:107467278 | 347.436 |