Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211646g00007 ATGCACCAAGTAGGGTTGTTCCCACACCGGTCACTGAAAGGCTTGGCTGAGAAACATGGGCCCTTGATGCTCCTCCACTTCGGGAAGGTTCCGGTGCTGGTGGTGTCTTCGGCGGACATGGCGGAAGAGGTGATGAAGACGCACGACTTGGTGTTGTCAAACAGGCCAAAACGCAAGATGAGTGACATACTCTTGTATGATTCTAAAGACATAGCCAACTCTCCTTATGGTGAACACTGGAGGCAGATAAGGAGCCTAAGCGTGTTGCACCTTCTGAGCAACAGCAGGGTTCAATCGTACGGTCGTGTTAGAGAAGAAGAAGCTGCAAGAATGGTTGAAACCATCAAAGAGTCTTCTTCTGTGCCGGTAAACTTGACTGAGATATTCTCCGGTGTTACCAATGACATAGTGTGTAGGATTGCTCTAGGGAGGAAGTACCGTGTAGGAGAAGAAGGGAGCAAGTTTCAGGAGCTGTTGTTGGATTTTGGAGAGTTGTTGGGTACAATATCAATAGGGGACTATGTTCCTTGGCTTAGTTGGTTGAACAACCTTAATGGTTCTTATAAACGAGCAACTAGAGTTGCACAGCGTTTTGATGAGTTTTTGGATCAAGTGATTGCGGAGCATGTTAGTTCTTTGAAATCGAAAGAAAAAGAGGGACTTGATGTTGATGAGTACCAAAAAGATTTTGTGGATGTTTTGCTTTCTGTCAAGAACACTAATAACTCTACTGGATTTGAATTTGATACAATAACAATGAAGGCAATAATCCTGGACATGTTTGCAGCAGGTACAGACACAACCTACACAGTGCTAGAATGGGCAATGGCAGAACTGTTAAAACGGCCAGCGGTTATGCACAAACTGCAAGAAGAAGTGAGAACTGTTGTTGGAAACAGAACCAACATAACAGAACAGGATCTGGTTCACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTCGGTTCCACCCTCCAATTCCTGTTCTAGTTCCTAGAAAATCCACCAAAGCCATCAAGCTGAATGGGTATGACATTGGAGAAGGAACACAGGTGTTGGTGAATGCATGGGCCATTGCAACGGATCCAAAGTGTTGGGACCAGCCACTTGAGTTCAAGCCAGAGAGGTTCTTAAACAGTTCAGTGGATTTCAAAGGGCAGGATTTTCAGTTTATTCCTTTTGGTGCAGGGAGGAGAGGGTGCCCTGGGATTCAGTTTGCCATTGCTGTTGATGAGATTGTGCTGGCTACCATTGTTCATCAATTTGATTGGGATTTGCCTCCTGATTCTGGGGAATTGGACATGTCTGAAACTTCTGGACTTGCTGTGCATTTGAAATCACCTCTCTTGGCAATACCAACTCCTCATTATCCATGA 1380 0.4478 MHQVGLFPHRSLKGLAEKHGPLMLLHFGKVPVLVVSSADMAEEVMKTHDLVLSNRPKRKMSDILLYDSKDIANSPYGEHWRQIRSLSVLHLLSNSRVQSYGRVREEEAARMVETIKESSSVPVNLTEIFSGVTNDIVCRIALGRKYRVGEEGSKFQELLLDFGELLGTISIGDYVPWLSWLNNLNGSYKRATRVAQRFDEFLDQVIAEHVSSLKSKEKEGLDVDEYQKDFVDVLLSVKNTNNSTGFEFDTITMKAIILDMFAAGTDTTYTVLEWAMAELLKRPAVMHKLQEEVRTVVGNRTNITEQDLVHMNYLKAVIKETLRFHPPIPVLVPRKSTKAIKLNGYDIGEGTQVLVNAWAIATDPKCWDQPLEFKPERFLNSSVDFKGQDFQFIPFGAGRRGCPGIQFAIAVDEIVLATIVHQFDWDLPPDSGELDMSETSGLAVHLKSPLLAIPTPHYP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211646g00007 459 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 356 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 315 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 132 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 CDD CYP71-like 18 450 - -
Stsc211646g00007 459 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS P450 superfamily signature 393 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 FunFam Cytochrome P450 83B1 1 453 - -
Stsc211646g00007 459 SUPERFAMILY Cytochrome P450 5 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
Stsc211646g00007 459 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211646g00007 459 PANTHER CYTOCHROME P450 71B11-RELATED 2 456 - -
Stsc211646g00007 459 Pfam Cytochrome P450 7 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211646g00007 Stsc-Chr211646 46149 49484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211646g00007 1 455 Cytochrome P450 AT3G48270 48.253 6.77e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211646g00007 - - gmx:100819183 600.512