Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211643g00004 ATGGAAGCTCATAGCTCTAAGGATGCACAAGTTATTGAAATCAGTGGAGATCGGGATGAAAGAAGGAATCCAGGAGGAAGTAAGATCTGTAGTGAAGCACCATGTGGTTTTGCAGATGCAGGATCCATCTCTAAAGATTCTGAGGAGCGATCAACTTCCATCCGAAAGCTTTTGATAGCAGTTGTCCTTTGCTTTATTTTCATGACTGTTGAAGTAATTGGAGGGATCAAAGCCAACAGTCTTGCAATATTAACAGATGCGGCACATTTGCTTTCAGACGTTGCAGCGTTTGCCATCTCCCTATTTGCATTATGGGCTGCCGGATGGGAAGCTACCCCCCGCCAGTCCTATGGATTCTTTAGAATAGAGATTCTTGGGGCATTGGTTTCCATCCAAATGATATGGTTGCTTGCTGGAATTCTAGTGTATGAAGCAATCGACAGAATGGTAGCAGGTTCTCGTGAGGTGGATGGCTTTTTAATGTTTTTAGTTTCTGCATTTGGTCTAGTGGTTAACATTGCGATGGCTTTGCTACTGGGCCACGATCACGGACATGGACACGGGCACGGACACGATCATGGGCATGGTCACGGACACGATCATGGTCACGGTCACGATCATCATGGCCATAGCCATGGATTCACCGGGTCTACACATGATCATCATCCCCACCATCATCATACAAAAGACGAGCACCATCATGATCATGATGATCACACACACCATGGTCATGAAGAACCACCAAAAGAGGAACACCACGAGCATAATCATGCTCACAAGGGTGTTACTCAACCACTTATTGGCGAACCTCAACCTGAGAAGAAGCGATGGAACATAAATGTACAGGGGGCTTATCTTCATGTACTTGGGGACTCTATCCAAAGTGTTGGTGTAATGATCGGCGGAGCGATCATCTGGTATAAGCCTGAGTGGCAAATAGTTGATTTGATATGTACGCTGATCTTTTCGGTAATTGTTCTCGGGACAACTATCAACATGCTTCGAAACATACTGGAGGTCCTTATGGAGAGCACACCGCGTGAGATCGACGCTACTAAGCTAGAAAGTGGGCTGCTGGAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCCATAACCGTCGGTAAGATCTTACTAGCTTGCCATGTTAAAGTCAGACCCGACGCAGATGCAGACATGGTTCTAGACAAGGTTATAGACTACATCAAAAGGGTTCATAACATCAGCCATGTAACAATCCAGATAGAGCGCTAG 1263 0.4576 MEAHSSKDAQVIEISGDRDERRNPGGSKICSEAPCGFADAGSISKDSEERSTSIRKLLIAVVLCFIFMTVEVIGGIKANSLAILTDAAHLLSDVAAFAISLFALWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRMVAGSREVDGFLMFLVSAFGLVVNIAMALLLGHDHGHGHGHGHDHGHGHGHDHGHGHDHHGHSHGFTGSTHDHHPHHHHTKDEHHHDHDDHTHHGHEEPPKEEHHEHNHAHKGVTQPLIGEPQPEKKRWNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLESGLLEMEEVVAVHELHIWAITVGKILLACHVKVRPDADADMVLDKVIDYIKRVHNISHVTIQIER 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211643g00004 420 MobiDBLite consensus disorder prediction 1 26 - -
Stsc211643g00004 420 NCBIfam cation diffusion facilitator family transporter 55 420 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Stsc211643g00004 420 MobiDBLite consensus disorder prediction 230 260 - -
Stsc211643g00004 420 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 11 420 - -
Stsc211643g00004 420 Pfam Cation efflux family 57 342 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Stsc211643g00004 420 MobiDBLite consensus disorder prediction 185 199 - -
Stsc211643g00004 420 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 348 419 IPR036837 -
Stsc211643g00004 420 MobiDBLite consensus disorder prediction 185 270 - -
Stsc211643g00004 420 MobiDBLite consensus disorder prediction 1 30 - -
Stsc211643g00004 420 SUPERFAMILY Cation efflux protein transmembrane domain-like 51 343 IPR027469 -
Stsc211643g00004 420 Gene3D Cation efflux protein transmembrane domain 53 341 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211643g00004 Stsc-Chr211643 27378 30325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211643g00004 1 420 Inorganic Solute Cotransporters AT2G46800 68.171 1.45e-180 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211643g00004 K14689 - gmx:100794876 570.081