LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211640g00002	ATGGATGTGAATAGGACAATATTGGTGTGCCAAAATCCCCACAGCTATGGTTACAAGGATGTTTGGCACTTAGGAAACCCTCTTGATTCCCCAACTTCTCTTCTATTTGTGCAGCTTTCTTTGATCACCATGCTATCTCAGTGCATTGAGGTTTGTCTCAAGCCATTAGGACAATCCTCCCTTGTTTCACAGATTCTTGGTGGAGTGATATTTGGGCCATCAGTGTTGGGACAAAAGAAGTCACTGGCAAATGCTTTGTTCCCAATGAAAGGTGCAATGGTGCTTGAAACACTTGCATCTTTTGGCCTAATGTTCTTCTTCTTCATAGTAACCGTCAAGATGGACCTTGCCACAATGCTAAGAACTGAGAAACAAGCCATAGCCATTGGTCTCTCCACATTCTTCATCACATTGGTAATCTCAGGTGGATTGTCATTCCTATTAATCAAGTATGTTTCCATGGACACAACCCTCTCAGATGCTCTCCCAGTCATAGCCATCTCACAAGCCATGACTGTCTTCATAGTGGTCTCTGTCCTCTTGACAGAGCTCAAGATCCTTAACACCGACATCGGCCGTCTCGCCATGTCCTCTGCGATGTCTGCTGACATTGGTAGCTTCTCCTTGATAGTTATCATCTTCGCGAAACTCGAGAACAAGGGTGGCAACCTTGTGTCCTTAGTTTGGATAATTCTGTCCATTGCAGCATTGATTGTCCTTATCATTTATGTGATGAGGCCTGCTGTGATATGGATGCTAAAGCAATCCGAAGGGAAGCCGGTCGACGAATTCTACATAGTTTGTATCTTGATCTTTGTCTTGATTGCTGGATTCCTCAGTGAGCTTATTGGGCAGCATTTCGTTATGGGGCCGATACTCTTAGGCTTGGCAATCCCGGAAGGGCCGCCGATGGGGACGGCTTTGATGGCAAAAATGGAGACTATATGTCTTGGATTCTTTTATCCAATCTACCTTGCTGTTAGTGGACTGAAAACTAATGTGTTCAAGATCAGCTTCAGGTCCTTTTGGATTGTTGGTGTTGTGGTGTTTGTGGCTTCCATTGCAAAGATTGGTGCTGTTATGTTGCCAGGGTATTATAGTAATAACATGTCCATCAAAGAATGTTGTATGATTGGCCTCATTCTAAATGCTAGAGGCATTGCAGAACTCACCCTATACAATATGTGGAAGGGTAGCAAGTTACTAACGGAGCAAGAGTTCTCTTTGATGGTGGTATCAATTTTGCTTGTAAATGCTATCATATCACCACTTCTAAAGATGTTATATGATCCTTCAGAACAATACCATGCCATAGGAAGATGCACAATTCAGCACACAAGGCGAGATTCGGAGCTTCGGGTCATGATCTGCATTCACAACAATGAAAACATCCCTACACTGATGAACATTATAGAAGCATCTTATGCAAGCAGAGAGAGCATGGTTGGAGTCATAGCATTAATCTTAGTAGAGCTTCTTGGAAGAACAAGGCCTCTTCTTCTTGCTCACCAAGAACATGATACATTGAGGTCAGAACCATGCAGCTCAACTCAAATAGACAATGCATTGAAGCAATATGCAGAGCAGAAGGAAGGATATGCATCAGTTCAATCCTTCTCATCCACCTCCAACTTCGAAACAATGCACGACGATGTCTGCAGAATAGCACTTGACAGAAAAGCCAACATTCTAATCATGCCTTTCCACAAGCGCTGGGAGATTGACGGTACAGTTCATGTCATGAACCGAGCAATGCAGATCATGAACACCCGTGTCCTCGAAAAAGCCCCGTGCTCGGTCGGAATCCTCGTGGACCGGGGAATCCTGTGTGGATCCTCGTCACTCTTAGTCTCTAGAACAACATACCACGTAGCAGTATTCTTCATAGGTGGCGCTGATGATGCTGAGGCTCTTGCTCACAGCTCAAGAATGGCCCGCCACGAGATAGTCCACGTGACGCTCGTCCGGTTCCTCCTCTTCGGAGAGGAGAATTCGAAGGAGAGGAAGCGCGACAGCGACCTTGTGGACGAGTACAGATACTATAACGCCGGGAACCGGCACTTTGAGGTGATGGATGAAGTGGTTAAAGATGGCATAGAGATGAGTTGTTGCATAAGGAGGATAATTGACTATTTTGACCTTGTGATGGTGGGAAGAGAACACCCTGAATGTGTTCTGCTTCAAGGACATGATCAGTGGAGTGAGTGTCCTGAGTTAGGGACAATTGGGGACATGTTGGCATCACAGGATTTTGTGACAAAGGCTTCGTTGCTTGTGGTGCAACAACAGAGGGTAAGAGGGAGGGTTGTTAATAAGAACACTAATAATAAGAATAATAATGTGAATAATCCTTTGCCAATTCAAAAGGATCAGATGATGATGGTTAATGATGGTGTTCTTCTTCCTCATGATGAGGTTAATAGAGCTTCTTGTTCTATTTCAGTAGTGGACAGATGA	2457	0.444	MDVNRTILVCQNPHSYGYKDVWHLGNPLDSPTSLLFVQLSLITMLSQCIEVCLKPLGQSSLVSQILGGVIFGPSVLGQKKSLANALFPMKGAMVLETLASFGLMFFFFIVTVKMDLATMLRTEKQAIAIGLSTFFITLVISGGLSFLLIKYVSMDTTLSDALPVIAISQAMTVFIVVSVLLTELKILNTDIGRLAMSSAMSADIGSFSLIVIIFAKLENKGGNLVSLVWIILSIAALIVLIIYVMRPAVIWMLKQSEGKPVDEFYIVCILIFVLIAGFLSELIGQHFVMGPILLGLAIPEGPPMGTALMAKMETICLGFFYPIYLAVSGLKTNVFKISFRSFWIVGVVVFVASIAKIGAVMLPGYYSNNMSIKECCMIGLILNARGIAELTLYNMWKGSKLLTEQEFSLMVVSILLVNAIISPLLKMLYDPSEQYHAIGRCTIQHTRRDSELRVMICIHNNENIPTLMNIIEASYASRESMVGVIALILVELLGRTRPLLLAHQEHDTLRSEPCSSTQIDNALKQYAEQKEGYASVQSFSSTSNFETMHDDVCRIALDRKANILIMPFHKRWEIDGTVHVMNRAMQIMNTRVLEKAPCSVGILVDRGILCGSSSLLVSRTTYHVAVFFIGGADDAEALAHSSRMARHEIVHVTLVRFLLFGEENSKERKRDSDLVDEYRYYNAGNRHFEVMDEVVKDGIEMSCCIRRIIDYFDLVMVGREHPECVLLQGHDQWSECPELGTIGDMLASQDFVTKASLLVVQQQRVRGRVVNKNTNNKNNNVNNPLPIQKDQMMMVNDGVLLPHDEVNRASCSISVVDR	818

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211640g00002	818	Gene3D	-	33	437	IPR038770	-
	Stsc211640g00002	818	Pfam	Sodium/hydrogen exchanger family	41	425	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Stsc211640g00002	818	PANTHER	CATION/H + ANTIPORTER	10	764	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211640g00002	Stsc-Chr211640	3831	10168	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211640g00002	8	762	Antiporter Super Family	AT2G13620	35.541	3.58e-168	505

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211640g00002	K26731		-	gmx:100779700	1040.41

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