Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211639g00007 ATGGTGAGAGAGCAAACGGCAGTTTCGTTCTACAAGAACCTCCGTGAATGGGCATCCAAGTCGTCGACGGCGCCGCTCCTCATCTTCCCTTCTACCTCCGACGTCGACTCACTTTGCGCCCTCAAGATCATCTTCCACATCCTCGAGTCCGACGGCGTCCAATACGCCTGCTACCCTGTCTCTTCCTTCAACGAGATCCACAACTACGCCGCCCCAACCCTCTCCTCCGCCGCCGATAACGGTGACTGCGTCTCAATGCTCTTAATCAACTGGGGCTGCCACCGGGACCTTCAGAAGACTCTCAATTTGCCACCCTCAGCTCGAGCTTTCGTTGTCGATAGCCACCGCCCCATCCATCTCAACAATATCAGCCAAGAAAATGAATCGGTGGTTGTTTTATTCACCGACGAGGATGAGAAGATTGCGGATCTCGTTTACAGTTTTGATGTTACTCTTGCTGAGTTGGCCAATGCGAGCTACATGTGCAGGGAAGGGAATGGATTGGAAGAAGAATCCGAAGAGGAATCGGATGAATCGGATGAGGAAGATAGCGAAAATGAAGATGAAGAGGGGTCTAGGAGAAAGAGGAGAAGGGTTTCAGATTCTGATCCGGTTCAGTTTTTTAAGAAGCAGGTTAAGAGATATTATAAATTGGGGACTTTTCATGGGAAGCCCTCCGGGTGTTTGATGTATGACCTAGCTGACTCGCTTCGGAAGAACACGAATGAGTTGTTGTGGTTGGCTTGTGTGTCTCTCACTGATCAGTTTGTTCATGAGAGGTTGAGTGATGAGAGGTACCGTGACGGTGTGGCCGAGCTAGAGGACCGGATTAGATGTGCTGGGAACTTGGATGTGGTTACTTCAGTTACTCTCAAGGATGGGACTAAGATCCGCGCGCCGAATTCGTGCAAGATTGCTTGTGAGGATGAGCCTAGGCTTATGTTGTTGAAGGAGTGGAGCTTGTTTGATTCAATGTTGTGCTCATCTTACATTGCTACGAAGTTGAAGACTTGGAGCGATAATGGGGTCAAGAAGCTGAATCTGTTGCTGGCTAGGATGGGGTTTGCCCTTGTGGATTGCCAGCAGAAATTCCAGTACATGAGCATGGAGGTAAAGAAGAAGATGAAACCTGAATTTGAGAAGTTTTTACCTGAGTATGGACTCACTGATTTCTATTATAGGAGTTTCTTGAGGATACATGGGTATAGCTCCAGGGTGTCGGCTGCGGATGTGGTGTATGGAGTGACTGCCTTGCTTGAATCATTCGTGAAATCGGATGGTTCTTGTGCATCAAAGNNNNNNNNNNATGCATTGTCTTTAAGCAATCTTGATAAGCTCAAGGCCGGGATGCAACACGCGATTAGGATCCAGAGAGCTATTCTAAGGCAAGGTAGCACTGCGATTACAAAGAATGGGTGTATAAGAAGCGGGAGGAAGTTTCGGTGGGTGAAGCTCGAGGATTCGGCTGACACCAAGTTGCTTGGTTATCCGCAGGCATTGACTAAGTTCTGTTATTTTCTTATGGATGCTTTGAGAGAGAAGGGGGCAAGGATGAAGCCTTTGCTTTGTGCTTGCTTGTCACAAGAACCCAACAGGATGTTGATTGTAGGCGTTTATGGGAAGCCTCGCCTGGCCGGAGCTCAGGGCAATGCATTTGGGATTGCGTTTAGGAACGCTGCTGAGGAGATTGGAGCAGAGTTCTTCCATGAGTTGTTTGAGTCATCATGGATTCTTCTTGATTCTTCCACTGTAAACTCGTTCATGGTCAGGTTGACTGAGAAGCTATGA 1788 0.4793 MVREQTAVSFYKNLREWASKSSTAPLLIFPSTSDVDSLCALKIIFHILESDGVQYACYPVSSFNEIHNYAAPTLSSAADNGDCVSMLLINWGCHRDLQKTLNLPPSARAFVVDSHRPIHLNNISQENESVVVLFTDEDEKIADLVYSFDVTLAELANASYMCREGNGLEEESEEESDESDEEDSENEDEEGSRRKRRRVSDSDPVQFFKKQVKRYYKLGTFHGKPSGCLMYDLADSLRKNTNELLWLACVSLTDQFVHERLSDERYRDGVAELEDRIRCAGNLDVVTSVTLKDGTKIRAPNSCKIACEDEPRLMLLKEWSLFDSMLCSSYIATKLKTWSDNGVKKLNLLLARMGFALVDCQQKFQYMSMEVKKKMKPEFEKFLPEYGLTDFYYRSFLRIHGYSSRVSAADVVYGVTALLESFVKSDGSCASKXXXXALSLSNLDKLKAGMQHAIRIQRAILRQGSTAITKNGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPNRMLIVGVYGKPRLAGAQGNAFGIAFRNAAEEIGAEFFHELFESSWILLDSSTVNSFMVRLTEKL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211639g00007 595 MobiDBLite consensus disorder prediction 164 197 - -
Stsc211639g00007 595 Pfam CDC45-like protein 436 594 IPR003874 GO:0006270
Stsc211639g00007 595 Pfam CDC45-like protein 27 423 IPR003874 GO:0006270
Stsc211639g00007 595 PANTHER CDC45-RELATED PROTEIN 1 594 IPR003874 GO:0006270
Stsc211639g00007 595 MobiDBLite consensus disorder prediction 168 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211639g00007 Stsc-Chr211639 51423 54043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211639g00007 1 595 Core DNA Replication Machinery Family AT3G25100 69.667 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211639g00007 K06628 - egr:104456527 885.945