Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211636g00005 ATGGATTCTTTGATCCTTGACTTGCTAGTAGCTCTTGTCTCCTTCACACTCTTTATTGTAGCAGCCCTGAAAATTGGAAGGAATCTAAAAAAAACTGAGTCAACTCCAAACATACCCCCAGGGCCATGGAAGCTTCCTATTATAGGAAGCATACACCATCTTGTTACATCCAAGCCGCATCGAAAATTAAGAGATTTGGCCAACATATATGGGCCATTGATGCACCTTCAACTTGGAGAGATATTCGCCATCGTTATCTCTTCACCAGAATATGCTAGAGAGGTCATGAAAACCCATGATGTGGTATTTGCATCAAGGCCTAAAATTCTTGCTTCAGAAATATTGTCATATGAATCTACAAACATAGTTTTTGCACCTTATGGAAATTATTGGAGACAGCTGAGGAAGATTTGCACCTTGGAGCTTTTCACCACCAAAAGGGTCAAGTCCTTCCAGCCAATAAGAGAACAAGAGTTCACCAATCTCATGAGAAGGATTGCTTCGGCGACGGCGAAAGGATCAACTGTCAACCTCACTGAAGAAGTAATGTCAACAATATATACAATCACTTCCAGGGCTGCATTTGGCATGAAATGTAAAGATCAAGAAAAATACATTTCAGTTATAAAAGCAGCAGTAATGCTCGGTGGAGGTTTTGATTTAGGAGATTTGTTTCCTTCTTCCAAATGGCTTCAAGTCATCAGTGGCATGAGGCCTAAGCTTGAGAAGAAGCAAAGAGAAGGTGATCAAATACTGGAAAACATCATCCATGTGCATAGAGAGGCAAAGTCAAAGGCCAAAGAAGGTGAACATGAACCAGATGAAGATCTTGTGGATGTTCTCCTAAAATTTGAGGGTGGTGATGCATCTGGCCAGGATATATGCTTAACTACAAATAACATTAAGGCTATCATTCAGGACATATTTGGAGCCGGAGGTGAGACATCATCAACTACTATAGATTGGGCAATGGCAGAGATGATGAAGGACCCAAGAATAATGCAGAAAGCACAGGTTGAGGTGAGAAACATATTTGACAAGATTGGAAGAAGGGTTGATGAGACTCACATCAATGAGCTCAAGTATTTGAAATCAGTTGTCAAAGAGACCCTCAGGTTACACCCTCCAGTAGCACTTCTGATTCCAAGAGAGAGTAGAGAAGCATGTGAGATCAATGGATATCACATACCTGTCAAAAGTAAGGTGATTGTGAATGCTTGGGCCATTGGAAGAGATCCAAAGTACTGGGATGAACCAGAGAGGTTTTATCCAGAGAGATTTGTTGATAGTAGCATTGACTACAAAGGAAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCAGCACATTAGGCTTAGTAAATGTTGAGTTGGCACTTGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCAAGTGGGATGAAACATGAGGAATTTGACTTGTCTGAGGAATTTGGAGCTACTATTAGAAGAAAAGATGACCTGCAATTGGTTCCCATTATTGTTTGTAATCCCTTACCTGAAACATAA 1548 0.405 MDSLILDLLVALVSFTLFIVAALKIGRNLKKTESTPNIPPGPWKLPIIGSIHHLVTSKPHRKLRDLANIYGPLMHLQLGEIFAIVISSPEYAREVMKTHDVVFASRPKILASEILSYESTNIVFAPYGNYWRQLRKICTLELFTTKRVKSFQPIREQEFTNLMRRIASATAKGSTVNLTEEVMSTIYTITSRAAFGMKCKDQEKYISVIKAAVMLGGGFDLGDLFPSSKWLQVISGMRPKLEKKQREGDQILENIIHVHREAKSKAKEGEHEPDEDLVDVLLKFEGGDASGQDICLTTNNIKAIIQDIFGAGGETSSTTIDWAMAEMMKDPRIMQKAQVEVRNIFDKIGRRVDETHINELKYLKSVVKETLRLHPPVALLIPRESREACEINGYHIPVKSKVIVNAWAIGRDPKYWDEPERFYPERFVDSSIDYKGSNFEYIPFGAGRRICPGSTLGLVNVELALAYLLYHFDWKLPSGMKHEEFDLSEEFGATIRRKDDLQLVPIIVCNPLPET 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211636g00005 515 CDD CYP71-like 70 501 - -
Stsc211636g00005 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc211636g00005 515 SUPERFAMILY Cytochrome P450 39 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PANTHER OS08G0105600 PROTEIN 62 506 - -
Stsc211636g00005 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 Pfam Cytochrome P450 39 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 FunFam Cytochrome P450 71D8 31 505 - -
Stsc211636g00005 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211636g00005 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211636g00005 Stsc-Chr211636 18898 21216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211636g00005 9 511 Cytochrome P450 AT3G26300 40.157 7.81e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211636g00005 - - gmx:100801936 772.311