Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211634g00007 ATGGAATCGAATCCCAGCCGTACAATTAAGCTTCTCTGCAGCTACGGCGGCAAGATCCTCCCACGCGCCACCGACGGTGAGCTCCGTTACGTTGGCGGACACACCAGAGTCCTCACCGTCGACCGTTCCATTTCCTTCTCAGAGTTGTTGTTGAAGCTTGGAGAATTGTGCGGTTCGTCCGTGACGTTACGGTGTCAATTGCCGAACGGAGACTTAGAAACCTTGATCTCCGTCACCAGCGACGAAGATCTGACGCACATAATCGAAGAATATGATCGCGCTTCGTCGAAGCTTCCTCATCCGTTGAAGATCAGAGCCGTGCTGTTTCCGCCGAAGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTCGTCTTCCTCTGCTTCATCCAGCGCCAGTCACTCTCCAGCCAGATCTCCGTACACCTCCGCGGAATCGCTGCCGCATGCGGCGGCGTATCGCATCCTCCGCCATAACCGTCCTGTCGCGGCCATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTGGATGGAAGCCCTAGGTTTCTTTATTATGGACCTCACTGCAGTAATTACTGCCATTGA 591 0.555 MESNPSRTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFSELLLKLGELCGSSVTLRCQLPNGDLETLISVTSDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKKVSPATSSPSSSSSASSSASHSPARSPYTSAESLPHAAAYRILRHNRPVAAIRNGSAKACCYNGQLDGSPRFLYYGPHCSNYCH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211634g00007 196 SMART PB1_new 23 109 IPR000270 GO:0005515
Stsc211634g00007 196 MobiDBLite consensus disorder prediction 115 142 - -
Stsc211634g00007 196 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Stsc211634g00007 196 CDD PB1_UP2 12 109 - -
Stsc211634g00007 196 Gene3D - 29 107 - -
Stsc211634g00007 196 PANTHER OS05G0427100 PROTEIN-RELATED 5 138 - -
Stsc211634g00007 196 SUPERFAMILY CAD & PB1 domains 25 116 - -
Stsc211634g00007 196 MobiDBLite consensus disorder prediction 115 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211634g00007 Stsc-Chr211634 54376 56973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211634g00007 9 115 MAP Kinase Kinase Kinase AT1G04700 47.664 9.95e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211634g00007 - - gmx:100810563 273.092