Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211634g00003 ATGGAATCTGAAGGAGCTAATAGGTTCTACTCTGTTGATGATGATGATGAGTTCAGATTGGATGCCAAGTGGCTTATTGATCCTAAGCATCTCTATGTTGGGCCAAGGATTGGTGAAGGAGCTCATGCCAAAGTCTATGAGGGAAAATACAAAAACCAGGCTGTTGCTATCAAAATTCTGCATAAAGGAGAGACTCCGGAAGATATCGCCAAGCGAGAAGGCCGGTTCGCGAGGGAGGTAGCTATGCTGTCTAGGGTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCATGCAAGGAGCCTGTGATGGTGATAGTCACTGAGCTCTTGTTGGGAGGAACGTTGCGAAAGTATTTGCTTAACATGCGACCCAAATGCTTGGACATGCATTTAGCCATTGGTTTTGCGCTTGATATTGCTCGCGCCATGGAGTGCCTGCATTCCCATGGGATCATCCACCGTGATCTTAAACCCGATAACTTGCTTTTAACAGAAGACCAAAAGATAGTCAAGCTAGCAGATTTCGGCTTAGCAAGAGAAGAATCATTAACTGAGATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCTCCTGAGTTGTATAGCACTGTCACACTGAGGCAGGGTGAGAAAAAGCATTACAATCATAAAGTTGATGCATATAGCTTTGCAATTGTGTTGTGGGAGCTCATACACAACAAAGTTCCTTTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCTGCAGCCTTCAAGAATGTAAGACCAAGCGCAGAGAATCTTCCTGAGGAATTGGCCGAAATCCTAACTTCGTGCTGGCAAGAGGATCCAAACGCCCGACCCAACTTCACTCAGATAATCCAGATGCTCCTGAATTATCTTTACACCATTACGCCGCCAGAACCTGTAATTCCTTCAAGAATATTCACTTCTGAGAACACTGTCTTGCCGCCGGAGTCACCCGGTACTAGGTCCTTGATGGCAAAACGCGATGACACTGGGGATACACCAAGAGCAACGGACGAAACCAAGCTTAACAGTTTTCTTTGCTGTTTCAGCCAGTGTTATTAA 1074 0.4534 MESEGANRFYSVDDDDEFRLDAKWLIDPKHLYVGPRIGEGAHAKVYEGKYKNQAVAIKILHKGETPEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDMHLAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKIVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELAEILTSCWQEDPNARPNFTQIIQMLLNYLYTITPPEPVIPSRIFTSENTVLPPESPGTRSLMAKRDDTGDTPRATDETKLNSFLCCFSQCY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211634g00003 357 ProSiteProfiles Protein kinase domain profile. 31 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211634g00003 357 CDD STKc_MAP3K-like 37 291 - -
Stsc211634g00003 357 Gene3D Transferase(Phosphotransferase) domain 1 112 300 - -
Stsc211634g00003 357 SUPERFAMILY Protein kinase-like (PK-like) 23 319 IPR011009 -
Stsc211634g00003 357 Gene3D Phosphorylase Kinase; domain 1 19 110 - -
Stsc211634g00003 357 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 291 - -
Stsc211634g00003 357 Pfam Protein tyrosine and serine/threonine kinase 34 291 IPR001245 GO:0004672|GO:0006468
Stsc211634g00003 357 SMART serkin_6 31 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211634g00003 357 PRINTS Tyrosine kinase catalytic domain signature 107 120 IPR001245 GO:0004672|GO:0006468
Stsc211634g00003 357 PRINTS Tyrosine kinase catalytic domain signature 262 284 IPR001245 GO:0004672|GO:0006468
Stsc211634g00003 357 PRINTS Tyrosine kinase catalytic domain signature 219 241 IPR001245 GO:0004672|GO:0006468
Stsc211634g00003 357 PRINTS Tyrosine kinase catalytic domain signature 145 163 IPR001245 GO:0004672|GO:0006468
Stsc211634g00003 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Stsc211634g00003 357 FunFam serine/threonine-protein kinase HT1 112 312 - -
Stsc211634g00003 357 FunFam Kinase suppressor of Ras 1 20 110 - -
Stsc211634g00003 357 MobiDBLite consensus disorder prediction 326 340 - -
Stsc211634g00003 357 ProSitePatterns Protein kinases ATP-binding region signature. 37 58 IPR017441 GO:0005524
Stsc211634g00003 357 MobiDBLite consensus disorder prediction 315 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211634g00003 Stsc-Chr211634 32138 34638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211634g00003 12 357 MAP Kinase Kinase Kinase AT5G50180 78.613 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc211634g00003 PK_Tyr_Ser-Thr 2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211634g00003 - - gmx:100796593 659.448