Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211633g00015 ATGCCCATGGCGACGGAGGAAGGGGATCCGGAGAGAAGTGAGATCAATGGCGGATACTCCATGGAATCAACCGAATCCAGGTGGGTTTTCCAGGGCGACGAGGAGGATAACTCCGATATAGAGGAATTCGACGCCGATTTGAGACAGCAACACCCTCGCAGATACGCTTCCGTGCTTGATTCCGACGACGAGGACATTGGTGAGCAGAGACTCATTCGAACTGGACCTCGAATTGATTCCTTCGATGTCGAGGCTCTTGATGTTCCCGGTGCTCACAGAACTGACTATGAGGATATCAGTATGGGAAAGAAAATCGTGCTTGTTTTTCAGACTCTTGGCGTTGTTTTTGGTGATGTGGGAACAAGTCCATTATATACCTTTAGTGTCATGTTTAGAAAGGCACCCATCAATGGAGATGAGGACATTCTTGGAGCATTATCACTTGNNNNNNNNNNCTGGTTGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCGTTGA 516 0.4729 MPMATEEGDPERSEINGGYSMESTESRWVFQGDEEDNSDIEEFDADLRQQHPRRYASVLDSDDEDIGEQRLIRTGPRIDSFDVEALDVPGAHRTDYEDISMGKKIVLVFQTLGVVFGDVGTSPLYTFSVMFRKAPINGDEDILGALSLXXXXWLFCGPMMMVKVVLLPCTR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211633g00015 171 Pfam K+ potassium transporter 109 149 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc211633g00015 171 MobiDBLite consensus disorder prediction 1 47 - -
Stsc211633g00015 171 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 101 148 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211633g00015 Stsc-Chr211633 67792 69941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211633g00015 11 145 Inorganic Solute Cotransporters AT5G09400 54.110 3.61e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211633g00015 - - gmx:100788190 205.682