LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211633g00008	ATGGAGGGTGTTTTGAGTAACAAGAAGTTAATTCTTGTGTTTGTTATTATGATTGGGTTGAGTATTGGTGCCACAAGAGTAGTGCATGGCCAAGGTACCCGTGTAGGGTTCTACTCAAGAACTTGTCCTAGAGCCGAGTCCATTGTCAGGTCCACTGTTCAATCCCACGTTAACTCCGATCGTACTTTGGCCGCTGGCCTTCTTAGAATGCACTTCCATGATTGCTTTGTCCAAGGCTGCGACGCTTCTGTCCTCGTCTCTGGCCCCAACACCGAGAGAACTGCATTCGCAAACCTCGGACTCCGAGGCTACGAGGTTATCGACGATGCAAAGACACAACTCGAGGCTGCTTGTCCCGGCGTTGTGTCTTGTGCCGATATCCTCGCCCTTGCTGCTCGTGACTCCGTTGTTCTGAGTGGTGGATTGAGTTGGCAAGTGCCAACAGGACGAAGAGATGGGCGTATATCACAGGCTTCAGATGCAAACAACTTGCCAGCACCTTTTGATTCAGTTGATGTTCAGAAACAAAAGTTTGCAGCTAAGGGACTCAACACACAAGACCTTGTTACTCTTGTAGGTGGACACACCATTGGAACTTCAGCATGCCAATTCTTCAGTAACAGATTGTACAACTTCACTGCAAATGGTGCTGACCCCACCATTAACCCTTCATTTGTTTCAACTCTACAAGGACTCTGCCCTCAGAACACTGGTGCTGCAAACCGTGTTGCACTCGATACTGGAAGCCAGTTCAAGTTTGATTCATCTTACTTCTCTAATCTGAGGAACGGTCGTGGGATTCTTCAGTCTGATCAGGCACTATGGAGTGATGCATCCACAAAGAGCATTGTGCAAAGATATTTGGGGATAAGAGGGCTTCTTGGATTGACATTCAATGTTGAATTTGGAAAGTCTATGGTTAAGATGAGCAACATTGGGGTCAAGACTGGTACTGACGGTGAAATCCGCAAGATTTGTTCTGCTTTTAACTAA	993	0.4683	MEGVLSNKKLILVFVIMIGLSIGATRVVHGQGTRVGFYSRTCPRAESIVRSTVQSHVNSDRTLAAGLLRMHFHDCFVQGCDASVLVSGPNTERTAFANLGLRGYEVIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRISQASDANNLPAPFDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSACQFFSNRLYNFTANGADPTINPSFVSTLQGLCPQNTGAANRVALDTGSQFKFDSSYFSNLRNGRGILQSDQALWSDASTKSIVQRYLGIRGLLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKICSAFN	330

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211633g00008	330	ProSitePatterns	Peroxidases proximal heme-ligand signature.	187	197	IPR019793	-
	Stsc211633g00008	330	CDD	secretory_peroxidase	34	329	IPR033905	GO:0004601\|GO:0042744
	Stsc211633g00008	330	PANTHER	PEROXIDASE 25-RELATED	16	323	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc211633g00008	330	FunFam	Peroxidase	165	309	-	-
	Stsc211633g00008	330	Gene3D	Peroxidase, domain 2	165	309	-	-
	Stsc211633g00008	330	Pfam	Peroxidase	49	287	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Stsc211633g00008	330	Gene3D	-	36	330	-	-
	Stsc211633g00008	330	PRINTS	Plant peroxidase signature	42	61	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc211633g00008	330	PRINTS	Plant peroxidase signature	102	115	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Stsc211633g00008	330	PRINTS	Plant peroxidase signature	244	259	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211633g00008	Stsc-Chr211633	26870	28435	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211633g00008	9	330	Peroxidase	AT2G41480	62.654	5.81e-150	423

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211633g00008	K00430		-	gmx:100820620	528.48

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