Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211633g00002 ATGAAGCCTTTAGGTACATTATTGTCAATGGCAGACAACTACTCATTAAGAAAATATAAAGGCAAAACCAAAACAAGAAAGCTTTATCTGTTCCTCCAATCACTCTTCCCTATCCTTGACTGGGGAAGATACTACACTTTCACAAACTTGAGAGGTGATTTCATTGCTGGTCTCACCACTGCATTTCTCTGCATTCCTCAGGACATTGCATACGCCAAGCTTGCAAATCTGGACCCTCACCATGCACTATATGCAAGCTTTGTCACACCTCTTGTGTATGCTGCCATGGGGAGCTCAAGAGACATTGCCATTGGACCTGCTGCTGTGGTCTCACTCTTGCTTGGAGCTATGATTTCTAATGAGATTAGAGACCATAAGAGCCATGAATATCTTCGCCTTGCTTTCACTGCTACCTTCTTTGCTGGAATTACTCAGCTCACACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGATTTCTTATCTCATGCTGCCATTGTTGGATTCATGAGTGGTGCTGCCATTATTATCACACTTCAACAGCTTAAAGGCCTCCTTGGCATACCACACTTCACTAAGAAAACTGATGTTATTTCTGGAATTGGATCAGTTAAGACTGCTATACTGCACCATGAGTGGAATTTGGAGACAATGATCATTGGAACATCATGCTTGGTCTTCCTTCTTATTACCAAGTACATTGGTAAAAAGCGTAAGAAACTCTTCTGGGTAGCTGCAATTGCTCCTATGACTTGTGTTATAGTGTCCACCATTTGTGTCTACATTACCAGGGCTGACGAGAGAGGCGTATTAACTGTTACATACATCAAGGGAGGTCTCAACTCTGTTTCTGCTAATGAAATTTTCTTTAGAGGAAAATATCTTGTACCAGGTTTTCGGATTGGTGCAGTTGCTGGTATTGTAGCACTCACGGAAGCTGTGTCAATTGGGAGAACATTTGCAGCCATGAAACATTATACACTGGATGGTAACAAGGAAATGGTGGCAATGGGAACCATGAACGTTGTTGGTTCTCTGACATCTTGTATTGTGGCCACAGGATCTTTCTCTCGGTCAGCAGTGAACAACATGGCTGGTTGTGAAACAGCAGCATCAAACATAGTTTTGTCCATTGTTGTATTGCTAGTACTCACATTGTTTACACCTGTGTTTAAGTACACTCCAAGTGCAGTGCTTTCTGCAATCATAATAGCAGCTGCAACAAACTTGGTGAACATAAATGCAGTTATTATGATTTGGAAGATTGACAAATTTGACTTTATGGTTTGCATGGGAGCCTTCTTTGGTGTTATCTTCATTAATGTTGAATATTCCCTTCTAATTGCGGTGTCAATATCTTTTGTGAAAATAGTGTGGAGAGTGACAAGGCCAAAGGTTGTAGTACTTGGTAAAATTCCGGGTACTTCTATTTACAGGAACATTGAGCAATATCCTAAGGCATTTCAGATAACTGCCATGCTCATTCTCAGGGTTGATTCTCCTATCTACTTCACTAACTGCAACTTTGTCAAGGACAGAATTCTGAGATGGTTGCGTTATGAAAATGAGGAGAGGGCAGAATGTGATTTAGCCGAAATAGAGTATCTGGTTGTTGACATGTCAGCCGTTAGTGATATTGACTCAAGTGGTATCCGATCATTGGAAGGGTTATATCATAGCCTTGAGAAAAGACAAGTCCAGCTTGTGTTGGCAAACCTGGGGAAGATTGTAATGGAGAAGTTGCAGACATCCAAGTTAACAGACTTAATTGGACCAAATAAAATATTCCTCTCAGTTGCTGGTGCTGTTATTACTTATGGTCCTAAGAGAGAAGAACTCTAA 1839 0.41 MKPLGTLLSMADNYSLRKYKGKTKTRKLYLFLQSLFPILDWGRYYTFTNLRGDFIAGLTTAFLCIPQDIAYAKLANLDPHHALYASFVTPLVYAAMGSSRDIAIGPAAVVSLLLGAMISNEIRDHKSHEYLRLAFTATFFAGITQLTLGVLRLGFLIDFLSHAAIVGFMSGAAIIITLQQLKGLLGIPHFTKKTDVISGIGSVKTAILHHEWNLETMIIGTSCLVFLLITKYIGKKRKKLFWVAAIAPMTCVIVSTICVYITRADERGVLTVTYIKGGLNSVSANEIFFRGKYLVPGFRIGAVAGIVALTEAVSIGRTFAAMKHYTLDGNKEMVAMGTMNVVGSLTSCIVATGSFSRSAVNNMAGCETAASNIVLSIVVLLVLTLFTPVFKYTPSAVLSAIIIAAATNLVNINAVIMIWKIDKFDFMVCMGAFFGVIFINVEYSLLIAVSISFVKIVWRVTRPKVVVLGKIPGTSIYRNIEQYPKAFQITAMLILRVDSPIYFTNCNFVKDRILRWLRYENEERAECDLAEIEYLVVDMSAVSDIDSSGIRSLEGLYHSLEKRQVQLVLANLGKIVMEKLQTSKLTDLIGPNKIFLSVAGAVITYGPKREEL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211633g00002 612 ProSiteProfiles STAS domain profile. 482 605 IPR002645 -
Stsc211633g00002 612 CDD STAS_SulP_like_sulfate_transporter 483 598 - -
Stsc211633g00002 612 SUPERFAMILY SpoIIaa-like 488 602 IPR036513 -
Stsc211633g00002 612 FunFam Sulfate transporter 31 462 607 - -
Stsc211633g00002 612 NCBIfam sulfate permease 37 601 IPR001902 GO:0016020|GO:0055085
Stsc211633g00002 612 PANTHER SULFATE TRANSPORTER 25 603 IPR001902 GO:0016020|GO:0055085
Stsc211633g00002 612 Gene3D STAS domain 462 606 IPR036513 -
Stsc211633g00002 612 Pfam Sulfate permease family 50 430 IPR011547 GO:0016020
Stsc211633g00002 612 Pfam STAS domain 484 601 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211633g00002 Stsc-Chr211633 8280 13002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211633g00002 16 608 Inorganic Solute Cotransporters AT1G22150 62.963 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211633g00002 K17470 - gmx:100784124 786.563