Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211633g00001 ATGAGTCAGCGTGTTAGTGATCAAGTTATGGCAGATGTCATAGCAGAAACAAGAAGCAACTCTTCTTCACATAGACATGGAGGAGGAGGAGGAGGAGATGATACTACTTCTCTGCCATACATGCACAAAGTTGGAACTCCACCTAAGCAGACACTCTTCCAAGAGATCAAGCATTCTTTCAATGAGACTTTCTTCCCTGACAAGCCATTTGGCAAGTTCAAAGATCAATCTGGATTCAGAAAGCTTGAGCTTGGACTCCAATATATCTTCCCTATTCTTGAATGGGGAAGACATTATGATCTCAAGAAATTCAGAGGTGATTTCATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGACCTTGCATATGCAAAGCTTGCAAATTTGGATCCTTGGTATGGACTATACTCAAGCTTTGTGGCACCTCTTGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCCATAGGACCTGTGGCTGTGGTGTCCCTCTTGCTTGGGACTTTGCTCTCCAATGAGATCAGTAACACCAAAAGCCATGACTACCTGCGCCTTGCATTCACTGCTACCTTCTTTGCAGGTGTCACTCAAATGCTACTTGGAGTTTGCAGGCTTGGCTTCTTGATAGATTTCCTATCTCATGCTGCCATTGTTGGCTTCATGGCTGGAGCTGCCATCACTATTGGACTGCAACAGCTTAAAGGTCTGCTTGGCATAAGTAATAATAACTTCACCAAGAAAACTGATATTATTTCTGTAATGCGCTCCGTTTGGACTCATGTGCACCATGGGTGGAATTGGGAGACTATACTCATTGGACTATCATTCTTGATCTTCCTTCTTATCACCAAGTATATTGCTAAGAAGAACAAGAAACTCTTCTGGGTATCTGCAATTTCTCCTATGATCAGTGTTATAGTGTCTACATTTTTTGTGTACATTACCAGAGCAGACAAGAGAGGCGTGTCAATTGTGAAACATATCAAGAGTGGTGTGAACCCATCATCTGCTAATGAAATCTTCTTCCATGGAAAGTATCTAGGAGCTGGTGTTAGAGTTGGTGTTGTAGCTGGCTTGGTAGCACTCACAGAAGCTATTGCAATTGGGAGAACATTTGCTGCAATGAAAGACTATGCACTGGATGGTAACAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCTTTGTCATCATGTTATGTGACAACAGGATCATTTTCTCGGTCAGCAGTGAACTACATGGCTGGTTGTAAAACTGCTGTTTCAAACATTGTCATGTCCATTGTTGTGTTGCTTACTCTTCTGGTCATCACACCACTGTTCAAGTACACTCCAAATGCAGTTCTTGCTTCCATTATCATAGCTGCTGTTGTGAACCTGGTGAACATTGAAGCAATGGTTCTGCTCTGGAAGATTGACAAGTTCGATTTCGTTGCTTGCATGGGAGCATTCTTTGGTGTCATCTTCAAGAGTGTTGAAATCGGCCTTCTAATCGCGGTGGCGATTTCGTTTGCCAAGATACTTTTACAAGTGACAAGGCCAAGAACTGCAGTTCTTGGGAAGCTTCCTGGGACTAGTGTTTATAGGAACATCCAGCAATACCCCAAAGCAGCACAGATTCCTGGGATGCTCATTATCAGGGTTGATTCTGCTATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATATTGAGATGGCTGATTGATGAAGGTGCTCAAAGGACAGAAAGTGAATTACCAGAAATACAGCATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGAATTATACAAGACCCTTCAGAAAAGAGAAGTTCAGCTTATCTTGGCTAATCCGGGGCCAGTTGTAATAGAGAAGCTGCATGCATCAAAGTTAACAGAACTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTATGGTCCCAAGACTGCAGCATTCTGA 2004 0.4232 MSQRVSDQVMADVIAETRSNSSSHRHGGGGGGDDTTSLPYMHKVGTPPKQTLFQEIKHSFNETFFPDKPFGKFKDQSGFRKLELGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEISNTKSHDYLRLAFTATFFAGVTQMLLGVCRLGFLIDFLSHAAIVGFMAGAAITIGLQQLKGLLGISNNNFTKKTDIISVMRSVWTHVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMISVIVSTFFVYITRADKRGVSIVKHIKSGVNPSSANEIFFHGKYLGAGVRVGVVAGLVALTEAIAIGRTFAAMKDYALDGNKEMVAMGTMNIVGSLSSCYVTTGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLVITPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPKAAQIPGMLIIRVDSAIYFSNSNYIKERILRWLIDEGAQRTESELPEIQHLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTELIGEDKIFLTVADAVATYGPKTAAF 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211633g00001 667 MobiDBLite consensus disorder prediction 16 38 - -
Stsc211633g00001 667 SUPERFAMILY SpoIIaa-like 539 660 IPR036513 -
Stsc211633g00001 667 Pfam STAS domain 538 656 IPR002645 -
Stsc211633g00001 667 ProSiteProfiles STAS domain profile. 537 660 IPR002645 -
Stsc211633g00001 667 FunFam Sulfate transporter 31 517 663 - -
Stsc211633g00001 667 PANTHER SULFATE TRANSPORTER 51 659 IPR001902 GO:0016020|GO:0055085
Stsc211633g00001 667 ProSitePatterns SLC26A transporters signature. 133 154 IPR018045 GO:0008271|GO:0008272
Stsc211633g00001 667 Gene3D STAS domain 517 662 IPR036513 -
Stsc211633g00001 667 Pfam Sulfate permease family 104 485 IPR011547 GO:0016020
Stsc211633g00001 667 CDD STAS_SulP_like_sulfate_transporter 538 653 - -
Stsc211633g00001 667 NCBIfam sulfate permease 91 656 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211633g00001 Stsc-Chr211633 3508 7206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211633g00001 39 663 Inorganic Solute Cotransporters AT1G22150 73.482 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211633g00001 K17470 - gmx:100784124 1007.67