Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211632g00005 ATGAGGAGTGGTAGGAGGAAGAGGAAGTTGCATTTGAGCAAGCTATACTCATTCACATGCTGTAGAGCATCATCTTTTGAAGATGAACTCTATTCTCAGATTGGGGGAAGGGGTTATTCAAGGGTAGTGTTGTGCAATGAGCATGGTGGTAATTTAGAATCCGAGGTTGTTAGGGACTATGCAGATAACTCTGTTAGGTCTACAAAGTACACCCCTGCTACATTCCTTCCGAAATCGCTCTTCGAGCAGTTTAGGAGGGTGGCTAACTTCTATTTCTTGGTTACTGGCATCTTGGCATTCACGAAACTCGCGCCTTTTAATGCTGCCAGCGCTATCTTCCCCTTGATTATCGTTGTAGGGGCGACTATGGTGAAGGAAGGCATCGAAGACTGGCGCCGCAAAAAGCAGGATATTGAGGTTAACAATAGAAGAGTGAAAGTGCATAAAGGGGATGGAAATTTCGAATATACCGAATGGAAGAATCTGAGAGTTGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCTGCAGACCTCTTATTGCTTTCGTCGAGTTATGAGGATGCAGTATGCTATGTTGAGACGATGAATTTGGATGGCGAGACGAATTTGAAGTTGAAACAAGGCTTAGAGATAACTTCTTCCTTACATGGAAATCTCAGCTTCCAAAAGTTTAGAGCCACGGTCAAGTGTGAAGATCCAAATGCTAATCTTTACTCGTTTGTTGGGAGCTTAGAATTCGGAGACCAAAAGTATCCCCTTTCGCCTCAGCAGCTTCTTCTTCGAGACTCCAAACTTCGTAATACAGACTACATTTTCGGAGCTGTGATCTTCACTGGTCATGACACTAAGGTTATCCAAAATTCTACTGATCCTCCTTCGAAAAGAAGCAGAATTGAGAGGAAGATGGATAGAGTAATCTACTTCTTGTTCTGCATCTTGTTTCTAATGGCGTTTGTTGGATCTATTTTCTTTTACATCTTAACTAAAGATGACTTGCAAGGTGGATCAATGAAAAGATGGTATCTAAGACCAGATGATACTACGGTTTTCTTCGATCCGAAAAGACCAGCTGCTGCTGCTGCATTTCACTGTTTGACAGCATTGATGTTATATGGCTTCTTTATTCCGATATCTCTTTATGTGTCGATCGAGATTGTTAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTATGAGCAAGCAGACAAACCGGCTAATGCCCGGACTTCTAACTTAAATGAAGAACTCGGCCAAGTTGACACAATTCTTTCTGATAAAACTGGAACTCTTACTTGCAATTCAATGGAGTTTGTCAAATGTTCTATTGCCGGGGTTGCTTACGGCCGTGGCATTACAGAGGTTGAGAAGGCCATGGGTAAAAGAAAAGGTTCACCTCTAAATCATGAGCAAGTTATAGGGTCAGAACCCAACAGCATCAATGAATCTTCAAATGGAAAAGCCTCCATAAAGGGCTTTAACTTCATTGATGAAAGGATAATGAATGGAAATTGGGTTAATGAACCTCATGCTGATGTCATCCGAAGATTCTTTCGCCTTTTGGCTATCTGTCATACGGCTATACCAGAAATGGATGAAGACACAGGAAATGTCTCGTATGAGGCTGAATCGCCTGATGAAGCAGCATTTGTGATTGCAGCCAGAGAAATTGGTTTCGAATTCTGTAAAAGGACTCAAACTAGTGTATCAACATTCGAGTTGGATCCTGTTTCAGGCAAAAAAGTTGAAAGGGTGTACAAGCTTCTCAATGTTTTGGAATTCAATAGCTCGAGGAAGAGGATGTCTGTCATAGTGGAGGATGAAGAAGGAAAGATTTTTCTGTTATGCAAAGGCGCCGATAGTGTCATGTTTGAAAGGATAGCCAAGAATGGGAGGGAGTTCCAAGATAAAACCATGGAGCATGTTCATGATTATGCCGATGCAGGTCTAAGGACTTTGATATTAGCCTATCGGGAGCTCGACGTGGAAGAATACAAGGAGTTTCGCAACAAATTCTCTAAGGCTAAGAATTTGGTTTGTGCTGATCAGGAGAGACAGATTGAGAAAATATCAAACAAGATTGAGAGGAATCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAACTCCAAAACGGGGTTCCGGATTGCATTGACAAGCTTGCCCAAGCAGGAATCAAGATTTGGGTTTTGACCGGGGATAAAATGGAGACTGCAATCAATATAGGTTTTGCTTGTAGTTTGTTAAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGAGTCCGGAAATTAAAGCACTGGAAAAGGATGGAGACAAGCTTGCTATAATCAAGGCATCAAGGCAAAGTGTCCTCCAACAGATATCCGAAGGTGCTGCACAGCTGACAGCATACAGAGGAAGTTCTCAGCAGGCGTTTGCTTTGATCATCGACGGAAAATCACTCGTCTATGCTCTAGATGATAACATCAAGAACATGTTTCTAGAGCTTGCGATTCGCTGTGCATCTGTTATCTGTTGTCGCTCATCACCAAAGCAGAAGGCGCTGGTTACTAGATTGGTCAAATCTGGAACTCGGAAAACAACATTAGCCATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATTAGTGGCGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATCGCAATTGCGCAATTTCGATATTTGGACCGATTACTTCTTGTGCACGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAACATTACATTTGGATTCACATTGTTCTTATATGAGGTGTATGCATCCTTCTCTGGAGAACCTGCATACAATGATTGGCTTTTATCTATCTATAATGTCTTCTTTTCATCGCTTCCCGTGATTGCTCTCGGGGTGTTCGATCAGGATGTATCGGCTCGGTACTGCCTAAAGTTTCCATTGTTATATCAAGAAGGAGTGCAAAATGTCCTCTTTAGCTGGCGCCGGATACTCTCATGGATGCTTAACGGATTCATTAGCGCCATAATAATTTTCTTCTTCTGCACGAAAGCCATGGAACTTCAGGCCTTTGACTCGGAGGGAAGAACCGCCGGAAGGGATATACTCGGAGCAACCATGTACACTTGCGTGGTCTGGGTAGTAAATTTGCAGATAGCTTTAGCTATAAGTTACTTCACCATGATCCAACACATTTTCATCTGGGGTTCGATCGCTTTCTGGTACATCTTCCTTCTGGTATACGGCGCGATGTCCCCACATTTTTCGACGAATGCCTATCAAGTCTTTGCCGAGACTCTCGCGCCTTCTCCCATGTATTGGATTGTCACATTCTTTGTGGTGATCTCAACACTCATACCATATTTTTCATACTCAGCAATTCAGATGAGGTTCTTTCCCATGTTCCATGAAATTGTCCAATGGATAAGGTATGAAGGGAAGACGAAGGATCCCGAATATTGTCACATGGTGCGGCAGAGATCGTTGCGGCCAACAACCGTCGGATCAACAGCGCGGCTAGCAGCCATGGCTAACGACCGGCGAGACAGAACAACGATTAACCGTAGATAA 3618 0.427 MRSGRRKRKLHLSKLYSFTCCRASSFEDELYSQIGGRGYSRVVLCNEHGGNLESEVVRDYADNSVRSTKYTPATFLPKSLFEQFRRVANFYFLVTGILAFTKLAPFNAASAIFPLIIVVGATMVKEGIEDWRRKKQDIEVNNRRVKVHKGDGNFEYTEWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEITSSLHGNLSFQKFRATVKCEDPNANLYSFVGSLEFGDQKYPLSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIERKMDRVIYFLFCILFLMAFVGSIFFYILTKDDLQGGSMKRWYLRPDDTTVFFDPKRPAAAAAFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEQADKPANARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGVAYGRGITEVEKAMGKRKGSPLNHEQVIGSEPNSINESSNGKASIKGFNFIDERIMNGNWVNEPHADVIRRFFRLLAICHTAIPEMDEDTGNVSYEAESPDEAAFVIAAREIGFEFCKRTQTSVSTFELDPVSGKKVERVYKLLNVLEFNSSRKRMSVIVEDEEGKIFLLCKGADSVMFERIAKNGREFQDKTMEHVHDYADAGLRTLILAYRELDVEEYKEFRNKFSKAKNLVCADQERQIEKISNKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLESPEIKALEKDGDKLAIIKASRQSVLQQISEGAAQLTAYRGSSQQAFALIIDGKSLVYALDDNIKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLDRLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGEPAYNDWLLSIYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDSEGRTAGRDILGATMYTCVVWVVNLQIALAISYFTMIQHIFIWGSIAFWYIFLLVYGAMSPHFSTNAYQVFAETLAPSPMYWIVTFFVVISTLIPYFSYSAIQMRFFPMFHEIVQWIRYEGKTKDPEYCHMVRQRSLRPTTVGSTARLAAMANDRRDRTTINRR 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211632g00005 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 1160 - -
Stsc211632g00005 1205 FunFam Phospholipid-transporting ATPase 706 911 - -
Stsc211632g00005 1205 Gene3D - 121 291 - -
Stsc211632g00005 1205 FunFam Phospholipid-transporting ATPase 121 291 - -
Stsc211632g00005 1205 Pfam Phospholipid-translocating ATPase N-terminal 57 111 IPR032631 -
Stsc211632g00005 1205 PRINTS P-type cation-transporting ATPase superfamily signature 871 890 - -
Stsc211632g00005 1205 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Stsc211632g00005 1205 Pfam Cation transport ATPase (P-type) 539 631 - -
Stsc211632g00005 1205 SUPERFAMILY Calcium ATPase, transduction domain A 145 288 IPR008250 -
Stsc211632g00005 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 431 437 IPR018303 -
Stsc211632g00005 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 505 669 IPR023299 GO:0000166
Stsc211632g00005 1205 SFLD Haloacid Dehalogenase 412 922 - -
Stsc211632g00005 1205 MobiDBLite consensus disorder prediction 470 490 - -
Stsc211632g00005 1205 MobiDBLite consensus disorder prediction 476 490 - -
Stsc211632g00005 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 899 1149 IPR032630 -
Stsc211632g00005 1205 NCBIfam phospholipid-translocating P-type ATPase 60 1156 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Stsc211632g00005 1205 Gene3D - 552 706 IPR023299 GO:0000166
Stsc211632g00005 1205 FunFam Phospholipid-transporting ATPase 548 706 - -
Stsc211632g00005 1205 CDD P-type_ATPase_APLT_Dnf-like 62 1020 - -
Stsc211632g00005 1205 SFLD p-type atpase 412 922 IPR044492 -
Stsc211632g00005 1205 Gene3D - 707 911 IPR023214 -
Stsc211632g00005 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1149 IPR023298 -
Stsc211632g00005 1205 NCBIfam HAD-IC family P-type ATPase 842 953 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Stsc211632g00005 1205 SUPERFAMILY HAD-like 424 926 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211632g00005 Stsc-Chr211632 67322 73213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211632g00005 10 1197 Primary Pumps ATPases AT1G68710 72.683 0.0 1855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211632g00005 K01530 - gmx:100781421 2042.31