Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211629g00006 ATGGAAATCAGCAGCACCCACAATGGGAGTAGCATGATGTGGTTTTTCAAGGATAGAGGGTTTGATGATAACAGCATAAATGGGATTTTCAGAAAGTGCAAACGCCTTGAGAGTGTTCACAAAGAGAGAGCAGATGAGAATTGGGAATACTTGAGAAGCATTGGAATTCAAGAGAGGAAGATTCCCTCCATTGTTTCGAAATGCCCCAAGATCCTCGCGCTCGACCTCAACGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACATTAGGAACAAAACCCCATGAAGTCACCTCTGCCATAGCCAAGTTCCCTCACATACTCTCGCATAGTGTCGAAGAGAAGCTTTGCCCCCTTTTGGCCTTCTTTCAGGCATTAGGCATACCCGAGAAGCAACTTGGGAAGGTGATACTGCTCAATCCTCGGCTTATCAGCTACAGCATCGAAACAAAGCTGAAGGAGACTGTGGACTTCCTTGCTAGCCTTGGTCTTAATAAAGATGGAATGATTGGAAAAGTCATAGTCAAGGACCCGTTTATAATGGGTTATAGCGTTGATAAGAGGCTGCGGCCGACTTCAGAGTTTTTGAGATCGATAGGCCTAAGTGAGTTAGATCTTCAGGCAGTGGCTGTGAACTTCCCAGCAATCTTAAGTAGAGATGCTAAAAAGGTTTTGGTGCCTAATTATGATTTCTTAAAGAAATGTGGATTTCAAGATCAACAAATATCTGCTTTGGTTGTTGGTTTTCCTCCTATCTTGTTCAAGAGCATACAGAATTCTTTAGAGCCAAGGATTAGATACTGGGGTTTCCTCTGTCATAACATCGCGATGGCAACGTGGTCTTGCGAGTCCCATTGCCATATATGCATTGGTTTGCGGCATATTGATTTCTTTGCAGTAAGTTTCATGAGTTTTAAAGAAACATTTAGGTACAGAAACTCGGTCAGTATCTGA 954 0.4329 MEISSTHNGSSMMWFFKDRGFDDNSINGIFRKCKRLESVHKERADENWEYLRSIGIQERKIPSIVSKCPKILALDLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQLGKVILLNPRLISYSIETKLKETVDFLASLGLNKDGMIGKVIVKDPFIMGYSVDKRLRPTSEFLRSIGLSELDLQAVAVNFPAILSRDAKKVLVPNYDFLKKCGFQDQQISALVVGFPPILFKSIQNSLEPRIRYWGFLCHNIAMATWSCESHCHICIGLRHIDFFAVSFMSFKETFRYRNSVSI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211629g00006 317 Pfam mTERF 103 267 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 Pfam mTERF 14 122 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 Gene3D Transcription termination factor 3, mitochondrial 90 279 IPR038538 -
Stsc211629g00006 317 PANTHER CGI-12 PROTEIN-RELATED 24 165 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 243 278 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Stsc211629g00006 317 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc211629g00006 mTERF 2.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211629g00006 K15031 - gmx:100816929 452.981