Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211629g00005 ATGGAAGAAGTGCACCATGTTGTGGCTCCACCACACAAGAGCACCTTCCAGAAGCTAAAGGCAAGGCTCAAGGAAACTTTCTTCCCTGATGATCCTTTGAGACAATTCAAGGGACAACCATTCAAGACCAAGCTTGTTCTTGGAGCTCAATATTTCTTCCCTATTCTTCAATGGGGTCCTAACTATTCCTTCCAACTCTTCAAATGTGACCTTATTGCTGGCCTCACCATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCAAAGCTTGCAAACCTTCCACCAATTGTGGGACTATATTCTAGCTTTGTTCCTCCACTAGTTTATGCTGTCCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCAGTTTCTATTGCTTCTCTTGTGCTTGGATCCATGTTGAGGCAAGAAGTGTCTCCAACAATGGATCCTCTTCTCTTTCTTCAGCTTGCTTTCACTTCTACCTTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGGATTCTAAGGCTTGGGTTTATCATTGACTTTCTATCAAAGGCCATACTTATTGGATTCATGGCTGGAGCAGCTATAATTGTATCACTGCAACAACTTAAGAGCCTTCTTGGAATCACACATTTCACTAAACAAATGGGCCTTGTTCCTGTTATGACTTCTGTCTTTCACAATGTGCATGAGTGGTCATGGCAAACAATACTAATGGGAATTTGCTTCTTGATTTTACTACTACTGGCAAGGCACATTAGTATAAGAAAACCAAAACTTTTCTGGGTCTCAGCTGGTGCTCCTCTTGTATCAGTTATCATCTCAACTATCTTGGTTTTTGCAATTAAGGGCCAAAACCATGGCATCAGTGTAATTGGAAAATTGCAAGAAGGAATAAACCCTCCTTCTTGGAACATGTTGAGGTTTCATGGAAGTCATTTAGGCCTGGTCATAAAAACTGGCATCATCACAGGCATTTTATCCCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCTCTCAAAAACTACAAAGTGGATGGTAATAAAGAAATGATGGCCATTGGATGCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCCTTCTCTCGCTCGGCGGTTAATAACAATGCCGGGGCGAAATCAGCCGTGTCAAATGTAGTGATGTCTGTGACAGTCATGGTGACCCTCCTCTTCCTTATGCCATTGTTCCAATACACACCTAATGTTGTGTTGGGTGCAATCATAGTCACCGCGGTGATCGGTCTCATCGATATCCCTGCTGCGCTCCTCATTTGGAGGATCGACAAATTCGATTTCATAGTTATGTTGACTGCATTCTTTGGTGTTATTTTCATCTCTGTCCAGCAAGGACTTGCTCTCGCAGTTGGGTTATCAACATTTAAGATATTACTGCAAATTACAAGGCCTAAAACAGTAATGTTGGGGAAGATACCAGGAACAGACATATATAGAAATCTTCATCAGTATAAGGAAGCTGTGAGAGTACCTGGTTTTCTCATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATAACATACCTCAATGAAAGGACGTTACGATGGATTGAAGATGAAGAAGACAACAAAAAGGAACACTCAAGCCTTCAATTTGTGATCCTGGAAATGTCAGCCGTGAGCGCCATCGACACAAGTGGAATTTCACTTTTCAGGGATTTGAAAGCAACACTAGAAAAGAAGGAGATTGAGGCAAGGATCCTAAACTGTCATTTACTTGATTTATTTACACACTTTGATACATAA 1794 0.4197 MEEVHHVVAPPHKSTFQKLKARLKETFFPDDPLRQFKGQPFKTKLVLGAQYFFPILQWGPNYSFQLFKCDLIAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTMDPLLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKQMGLVPVMTSVFHNVHEWSWQTILMGICFLILLLLARHISIRKPKLFWVSAGAPLVSVIISTILVFAIKGQNHGISVIGKLQEGINPPSWNMLRFHGSHLGLVIKTGIITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGCMNVVGSFTSCYVTTGAFSRSAVNNNAGAKSAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAALLIWRIDKFDFIVMLTAFFGVIFISVQQGLALAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPGFLILSIEAPINFANITYLNERTLRWIEDEEDNKKEHSSLQFVILEMSAVSAIDTSGISLFRDLKATLEKKEIEARILNCHLLDLFTHFDT 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211629g00005 597 Gene3D STAS domain 478 596 IPR036513 -
Stsc211629g00005 597 Pfam Sulfate permease family 67 447 IPR011547 GO:0016020
Stsc211629g00005 597 PANTHER SULFATE TRANSPORTER 13 586 IPR001902 GO:0016020|GO:0055085
Stsc211629g00005 597 CDD STAS_SulP_like_sulfate_transporter 499 587 - -
Stsc211629g00005 597 ProSiteProfiles STAS domain profile. 498 597 IPR002645 -
Stsc211629g00005 597 ProSitePatterns SLC26A transporters signature. 96 117 IPR018045 GO:0008271|GO:0008272
Stsc211629g00005 597 Pfam STAS domain 499 586 IPR002645 -
Stsc211629g00005 597 NCBIfam sulfate permease 54 587 IPR001902 GO:0016020|GO:0055085
Stsc211629g00005 597 SUPERFAMILY SpoIIaa-like 504 587 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211629g00005 Stsc-Chr211629 56241 62858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211629g00005 3 585 Inorganic Solute Cotransporters AT3G15990 67.179 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211629g00005 K17471 - gmx:100787284 982.245