Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211626g00007 ATGCTATCTCGATCTTGCTTAGGGCTATTGAATTTGGTATCGGTCGATGATTACCAGGCACTGAGCCGCATACCCACCCCCATGGCGCTTCCGGGAGGAACCACCCGGGACTCATACCAGATCAACCGCGACACCGCCGGATCCGACGACGCCGTTACCCCTCCCCCTCAAGAACGAAGAATCATCGTTGCCAACCAGCTCCCTATAAAAGCCACGCGCGATTCAGATACCAAGAAATGGATCTTCGACTACGACGCCGACAGCCTCTACCTCCAGCTCAAGGACGGCTTCCCCTCCGACGTCGAGGTCCTCTACGTCGGCTCCCTCAAGGCAGACGTCGACCCTTCGGAGCAGGACGAGGTGTCTCAGCTCCTCCTTGAGCGGTTCCGGTGCGTCCCCACCTTCCTCCCTTCTGAAATTCAGAACAAATTCTACCATGGATTCTGCAAGCACTATCTGTGGCCCCTGTTTCATTACATGCTTCCCATGTCTCCGAGCCACGGCGCCCGTTTCGACCGCGCCCAGTGGCAGGCCTACGTCCTCGCCAACAAGATCTTCGCCGATAAGGTCACGGAGGTCATAAACCCCGACGAGGATTTCGTTTGGGTTCACGATTACCACCTCATGATACTCCCCACTTTCTTGAGGAAAAGATTCCACCGCGTGAAGCTAGGGTTCTTCTTGCACAGCCCCTTCCCTTCTTCGGAAATCTACAGGACTCTACCCGTTCGTGATGACATACTCAGAGCCTTCTTGAACTGCGACCTCGTCGGTTTCCACACCTTCGATTACGCCAGGCACTTCTTGTCTTGCTGCAGCAGAATGCTTGGTTTGGACTACGAGTCTAAGAGAGGTTACATTGGCTTGGATTATTATGGAAGAACCGTTACTATTAAGATTCTTCCCGTTGGGATTCACATGGGCCAGCTTCGCTCCGTCTTGTCTCTGCCACGGACCGCCAAGAGGGTGGAGGAGTTGAGGGTTGAGTATGAGGGTAAGGTTGTCATTCTTGGCGTCGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCTTGGCAATGGGGCAGCTTCTTGAGGTTCATGAGGGCTTGAGAGGGAAGGTTGTGTTGGTTCAGATTCTGAACCCTGCCAGGAGCTCAGGGAAGGATATTCAAGACGTGAAGAATGAGTCTGAGGCCATTGCTAAGGAGATTAACGAGAAATATGGCAGGCCAGGGTACCAGCCTATTGTTTTTGTGAATGGTCCAGTTTCAACGGAGGATAAGGCTGCTTACTATGCAATTTCTGAGTGTTGTGTGGTGAATGCGGTGAGGGATGGGATGAACTTGGTGCCTTACACATACACTGTTTGCAGGCAGGGTCCTGTTGAGGATTCTGAGAGTGAGAGGCCTAAGCAGAGTGTTATCATTGTATCTGAGTTCATTGGCTGCTCTCCCTCCCTGAGCGGAGCAATCAGGGTGAACCCTTGGAACATTGAGGATGTTTCCGAGGCTATGAATTCCGCCATCACGATGGCGGAGGGGGAGAAGCACTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCCCATGATGTGGCCTATTGGGCTAGGAGTTTTGATCAGGATTTGGAGAGGGCTTGTAGGGAGCATTACCTCAAGAGGTATTGGGGTGTCGGTTTTGGTCTTGGTTTCAGGATCGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCAGTCGATAACATTGTCTCTGCATACAAAGATACACACAGCCGCTTGATCCTTTTGGACTATGATGGCACTATGTTGCCTCAGGCATCCATAAACAAGACCCCAAGCCCTGAGGTTATCTCTGTATTGAACTATTTATGCAGTGATCCCAAGAATATGGTGTTCATTGTGAGTGGCAGAGACAAGGATTGCCTCAGCAGGTGGTTTGATCCTTGTGAGAAGTTGGGCCTCTCTGCAGAACATGGCTACTTCACTAGGTTGAGGAGGGATACTCGTTGGGAGACATGCGGGTTGACAACTGATTTTGACTGGAAGAAGATGGCAGAACCTAATGTGCTGGCCAATGAGCCTGTTGTTGTCAAAAGGGGACAACACATAGTTGAAGTGAAACCTCAGGGTGTGAGCAAAGGTATAGTTGTGGAGAATCTAATATCAAGCATGAGGAGTGAGGGTAAATCACCAGATTTTCTGTTGTGCATAGGGGATGATCGATCAGATGAAGACATGTTCGAAAGCATTGCTCGTTCAGTTTCTAATCCAGCACTTCCAACGATATCACAAGTGTTTGCATGCACGGTTGGCCAGAAGCCAAGCATGGCAAAGTACTATTTGGAAGATACCAGTGAAGTTATCAAGTTGCTACAAGGTCTTGCCACTGCCTCGGACCCTTCAGCTTTTCAGGAATCGCAACAGGGATCACTATAG 2418 0.5025 MLSRSCLGLLNLVSVDDYQALSRIPTPMALPGGTTRDSYQINRDTAGSDDAVTPPPQERRIIVANQLPIKATRDSDTKKWIFDYDADSLYLQLKDGFPSDVEVLYVGSLKADVDPSEQDEVSQLLLERFRCVPTFLPSEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLRSVLSLPRTAKRVEELRVEYEGKVVILGVDDMDLFKGISLKFLAMGQLLEVHEGLRGKVVLVQILNPARSSGKDIQDVKNESEAIAKEINEKYGRPGYQPIVFVNGPVSTEDKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQGPVEDSESERPKQSVIIVSEFIGCSPSLSGAIRVNPWNIEDVSEAMNSAITMAEGEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYKDTHSRLILLDYDGTMLPQASINKTPSPEVISVLNYLCSDPKNMVFIVSGRDKDCLSRWFDPCEKLGLSAEHGYFTRLRRDTRWETCGLTTDFDWKKMAEPNVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISSMRSEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSMAKYYLEDTSEVIKLLQGLATASDPSAFQESQQGSL 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211626g00007 805 Gene3D - 678 802 IPR023214 -
Stsc211626g00007 805 Gene3D - 588 665 IPR023214 -
Stsc211626g00007 805 SUPERFAMILY HAD-like 586 789 IPR036412 -
Stsc211626g00007 805 Gene3D Glycogen Phosphorylase B; 50 318 - -
Stsc211626g00007 805 MobiDBLite consensus disorder prediction 33 47 - -
Stsc211626g00007 805 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Stsc211626g00007 805 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 53 684 IPR001830 GO:0003824|GO:0005992
Stsc211626g00007 805 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 585 682 - -
Stsc211626g00007 805 FunFam Alpha,alpha-trehalose-phosphate synthase 313 523 - -
Stsc211626g00007 805 Pfam Glycosyltransferase family 20 59 539 IPR001830 GO:0003824|GO:0005992
Stsc211626g00007 805 Gene3D Glycogen Phosphorylase B; 319 524 - -
Stsc211626g00007 805 Pfam Trehalose-phosphatase 682 779 IPR003337 GO:0003824|GO:0005992
Stsc211626g00007 805 Pfam Trehalose-phosphatase 589 681 IPR003337 GO:0003824|GO:0005992
Stsc211626g00007 805 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 683 801 - -
Stsc211626g00007 805 CDD GT20_TPS 59 539 IPR001830 GO:0003824|GO:0005992
Stsc211626g00007 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 543 - -
Stsc211626g00007 805 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211626g00007 Stsc-Chr211626 61619 64649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211626g00007 10 804 Trehalose Biosynthesis Gene Families AT2G18700 63.754 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211626g00007 K16055 - gmx:100810498 1341.64