Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211625g00012 ATGGCGTTCGATCAAAATTCCGTAACAAAAGATCTGCGCCCGCTGAATGTAGTTACGACCATGGCTATGGCCGAGGAGCAATTCGTTTCACCGCCGGCCACCGCCACAGCCACCACGCCTCCCACCCCGAATTCAGGCCGCGAAATGGGAAGCCCCGGCACGCCGCAGGTGCCACTTTTTTACTCACCTACCGTCTCTGATGGCGCCACCCTCGTTGGATTGAGCTATGGGAATGTGCCCTCCACGGCGGCCACCACGTGGTGCTTACGTCCTGCCATGTCCATTGCCCATTCCAATGCCAACCCTCCCGTTGGGTTTAGTTATGGTCATAGTTGTTGTAATAGGGTTGCACCTGGCAATGCTGCTTTGAATTTGGGGAACTGGGTGGGGACTAATGGCGCATTAGATAAGGCTTATAATGACTCTGTTAATGGTTTTCCTGGTTACGGTGGTGTTAGGATTAACAGGGTTGTTGCTAATGCCACTGATCAGGCTAGTTATGGCCATGCTACTAACAACCGGCCTGATCATGTTGGTGACGATGGTGGCAGCGGCAGTGGCAGCGTTGATGAGTCGGTTTCGGGGAGGAAAGTGAAGTTCATGTGCAGCTTTGGTGGAAGGATTCTGCCTAGGCCTAGTGATGGGATGTTGAGATATGTTGGAGGGAAGACTAGGATTATTATTTCGTGCCCCGATGATGTTGAGCATATGATGGAGGAGTATGAAAAATTGATGGAGAGGTCCCCTGATGGCTCTGCTAAATTGAGGGTTTTCCTTTTCTCTGCTGCTGATCTTGAAATCTCCAGCGGGATGCACTTTGCAGACCTGCAAGATAGCGGGCAGAGATATGTGGAGGCCGTGAATGGAATTGCAGATGAGATTAGTATTGGGATCACTAGGAAGGAGAGCGTTGCAAGCGCAGCATCAACTCAGAATTCTGATTTGAGTGGCTCGGAGACCCTTGATGGTTTAATTTCTGGTGATGTAAGTGCAGTGCCTAAGGGAAATGTAACAAATTCTGACACTCCTTCAAATTTGATGGCTTCTGAGGCAGGTGGTGCTTCTCCAGTTTTGATGGGCATATCTGCTGCTAGGACTGGTCCTACCCACACACCATATTTTCACAATGAGGTCGACCTAGAGAGGTCTCCACCTGCTACCATGTCTCAGCAGCCAGTTGGGTTGCAGCAAACTGGGACGGAAATTCCATATTCTTCACCTTATTTACAGCCCTTCTTTGATTTGCGCCAGGAAGTTATGAATTATGCAGATTATGTCCAGATACCTCAGCAAACAGGGTTTCGAAATGCTCAGTTTCTAGGGAAGACAGGGCAAGTCTTCACTCAACCTCAGTTTCATGATAATAACAATCCCAGTTCAGCATCTCATCAGGTCATTCCTGGAGTGCAAATGACAATTACTCAACAAGGCATGCCTTCTCATGTTGGCATGAGGTCGAATGTCATCCAACCACAACAACTGATGCAACTGCAGCAAAATCGTTCAGAGCAGTATAATGATGAAAATACATCTGGGATGAGGATTCTCCAGCTTCCCACTGAGCATGGCTACAACACTTACCAGGTTCCAATGAATCAAGTCCCTTCTGTCATAGTTGGGGGTAATTATGGCTGGGTTCAGGTTCCTTCACAAGATCAAGTTGTTTTGTCTGATGGGCTATTACCTCAACAGCAGGTAATGGTCCCTGAGAAAAGCCAAAGAGTGGAGGACTGTTCAATGTGCCAAACAAAACTGCCTCATGCACATTCAGATTCGGTGGTTCAAGATCAACGTATTAATGGTGCAGGCCCAGTTCCTGATTCAGTCCCAGCTTACCATAGTCTTCCCATGGAGGACAACTCAAAAGCTCAGGCTGCAAACAATGTTATGTTGAGGGAAGGAATTGTTGAACAAGTATCTCAGGCTAAACCACAGGTTATTAGAAAACCAGAGTCCCCAGATGGACTAACTTGTACTGAAAAAACTGCACTTCCTCAAAATCTTGAGCCACACCCTGAAGGAGTTAGGATTTTTACGCAAAAGCTAGATGGTTCTGATTATCCTAGAAATTCAACTACCTTCGAAACCATTGGAAGGACAGGGGGTATACAATCTCCAACACTCTCTCCAATTGATGGGCTCATGGGCACTTCACAATTATCTTATATCGATGATGTTCCCCACCGGCATATATGTCCAGTTGAAAACTCGGGTAAACAGGATGTGCTTGTGAATAAACCTGGCCATAACAATATATCTAATGTTGATGGGACAGCTATACAATCTTCAGAGTGCATGGCCCAAGGATCTCCCAAAGAATATTCTAATGATCTTTCTGGTGTTGTACCAAAGTCAGAGTTAGTGGATAGGATTACACAAGAACATCTGAAATCTATTGATGGAAGGGTGGACAACCTCAATGTATGCATTCCTGAAGTTCGTGCGAGTAATGATCACTGCTTGCAGCCGGTTGATAAATCTAGCGGGATTACTAGGATCACAGGTATGCTGCCTTCTTCTACAGAAATTTTGTATGCCCGAAATTCCAGGACAGGGGAATACAGTGAGGTTGCACAACACGCCGTTTGGGGCATTCCTGGTTTGAATCATCAGCCACATATAGCAAACCACCACAAGGATGATGCACCATCATCAATATCACAATCTGTAAGGTTTGGAGATATTCAGGATTCTACAAACTCACTTTTCAGCAATCAAGATCCTTGGAATATACAGCATGGAAACTCTGGCGAACAAAATTTAGGAGCACAATTTGATGATGGCCTCTACCAGTCTTTGAAACAGCATTTACCTTTAGAAAATGTTCGATCTGCCAGAGGTTCAGCAGAAGATCAACAACTACAAGCTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACTCAAGAATTCCTTCAAATGCTGACTTGCATGCCAGGGACAATATTTACCTTGAAAACACAGAGGACGGTGAAGATAAAAAGAATATGATAGATGTTCAGTTTAAAGCTGAAACTCAGAGCATCAAGAGCAGGCAACTGGAAACAGCAAATTTTGGCTTTCCAGCATCAGATGTTGGAGGATTGCAGGTAATAAAGAACTGTGACCTTGAAGAGCTTACAGAGTTAGGATCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTCGCAGGAAAGCCTTCAGAGCAAGAGCGAATGAGAGCTGACTTTTGGAATGAGGCAATCAAGCTTGCTGATTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAAATGCCTTGCTGAAGAATGGGAGGAACCTTGACAAGCGCAAGCGACTCTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTATCTGCATGGAAAAAACATAGTTCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCCCACCGCCCAATATGCAAGGTTGGTGACTTGGGCCTATCCAAAGTGAAGCGTCAGACACTGATCTCTGGCGGTGTGAGAGGAACTCTACCTTGGATGGCTCCGGAGCTGCTGAATGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTTTTCTCATTTGGTATTGTCATGTGGGAACTCTTAACTGGTGAAGAGCCATATGCTGATTTGCACTATGGTGCCATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCGGTTCCAGAATCTTGCGATTCAAACTGGAGGTTGCTGATGGAGAATTGCTGGTCATCAGAGCCATCAGAGAGACCTAGCTTCACTGAGATTGCGAATGAATTGCGATCCATGGCGACCAAGATCACCGCCAAGGTTCAAAATCAGCAGCAGCAGCAGCAGCAACAACAACCCTCTTCCTCCCAGAGCCAAGTGCAGAAATGA 3996 0.46 MAFDQNSVTKDLRPLNVVTTMAMAEEQFVSPPATATATTPPTPNSGREMGSPGTPQVPLFYSPTVSDGATLVGLSYGNVPSTAATTWCLRPAMSIAHSNANPPVGFSYGHSCCNRVAPGNAALNLGNWVGTNGALDKAYNDSVNGFPGYGGVRINRVVANATDQASYGHATNNRPDHVGDDGGSGSGSVDESVSGRKVKFMCSFGGRILPRPSDGMLRYVGGKTRIIISCPDDVEHMMEEYEKLMERSPDGSAKLRVFLFSAADLEISSGMHFADLQDSGQRYVEAVNGIADEISIGITRKESVASAASTQNSDLSGSETLDGLISGDVSAVPKGNVTNSDTPSNLMASEAGGASPVLMGISAARTGPTHTPYFHNEVDLERSPPATMSQQPVGLQQTGTEIPYSSPYLQPFFDLRQEVMNYADYVQIPQQTGFRNAQFLGKTGQVFTQPQFHDNNNPSSASHQVIPGVQMTITQQGMPSHVGMRSNVIQPQQLMQLQQNRSEQYNDENTSGMRILQLPTEHGYNTYQVPMNQVPSVIVGGNYGWVQVPSQDQVVLSDGLLPQQQVMVPEKSQRVEDCSMCQTKLPHAHSDSVVQDQRINGAGPVPDSVPAYHSLPMEDNSKAQAANNVMLREGIVEQVSQAKPQVIRKPESPDGLTCTEKTALPQNLEPHPEGVRIFTQKLDGSDYPRNSTTFETIGRTGGIQSPTLSPIDGLMGTSQLSYIDDVPHRHICPVENSGKQDVLVNKPGHNNISNVDGTAIQSSECMAQGSPKEYSNDLSGVVPKSELVDRITQEHLKSIDGRVDNLNVCIPEVRASNDHCLQPVDKSSGITRITGMLPSSTEILYARNSRTGEYSEVAQHAVWGIPGLNHQPHIANHHKDDAPSSISQSVRFGDIQDSTNSLFSNQDPWNIQHGNSGEQNLGAQFDDGLYQSLKQHLPLENVRSARGSAEDQQLQAVAEDVAASVLHSRIPSNADLHARDNIYLENTEDGEDKKNMIDVQFKAETQSIKSRQLETANFGFPASDVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSNWRLLMENCWSSEPSERPSFTEIANELRSMATKITAKVQNQQQQQQQQQPSSSQSQVQK 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211625g00012 1331 Gene3D Transferase(Phosphotransferase) domain 1 1124 1331 - -
Stsc211625g00012 1331 Gene3D Phosphorylase Kinase; domain 1 1029 1123 - -
Stsc211625g00012 1331 ProSitePatterns Protein kinases ATP-binding region signature. 1042 1073 IPR017441 GO:0005524
Stsc211625g00012 1331 MobiDBLite consensus disorder prediction 1306 1331 - -
Stsc211625g00012 1331 MobiDBLite consensus disorder prediction 167 192 - -
Stsc211625g00012 1331 CDD STKc_MAP3K-like 1042 1299 - -
Stsc211625g00012 1331 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1029 1123 - -
Stsc211625g00012 1331 Coils Coil 1296 1316 - -
Stsc211625g00012 1331 PRINTS Tyrosine kinase catalytic domain signature 1155 1173 IPR001245 GO:0004672|GO:0006468
Stsc211625g00012 1331 PRINTS Tyrosine kinase catalytic domain signature 1226 1248 IPR001245 GO:0004672|GO:0006468
Stsc211625g00012 1331 PRINTS Tyrosine kinase catalytic domain signature 1270 1292 IPR001245 GO:0004672|GO:0006468
Stsc211625g00012 1331 PRINTS Tyrosine kinase catalytic domain signature 1118 1131 IPR001245 GO:0004672|GO:0006468
Stsc211625g00012 1331 Pfam Protein tyrosine and serine/threonine kinase 1039 1299 IPR001245 GO:0004672|GO:0006468
Stsc211625g00012 1331 MobiDBLite consensus disorder prediction 31 53 - -
Stsc211625g00012 1331 ProSiteProfiles Protein kinase domain profile. 1036 1303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211625g00012 1331 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1124 1317 - -
Stsc211625g00012 1331 MobiDBLite consensus disorder prediction 326 345 - -
Stsc211625g00012 1331 MobiDBLite consensus disorder prediction 29 53 - -
Stsc211625g00012 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1161 1173 IPR008271 GO:0004672|GO:0006468
Stsc211625g00012 1331 PANTHER SERINE-THREONINE PROTEIN KINASE 228 1304 - -
Stsc211625g00012 1331 SMART serkin_6 1036 1307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211625g00012 1331 SUPERFAMILY Protein kinase-like (PK-like) 1030 1298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211625g00012 Stsc-Chr211625 71318 76888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211625g00012 196 624 MAP Kinase Kinase Kinase AT3G46920 33.403 1.22e-52 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Stsc211625g00012 PK_Tyr_Ser-Thr 2.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211625g00012 - - adu:107458739 2322.74