Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211625g00002 ATGAGGCAGCAAGCCAATGAAACTGGAGAAGCTGCTGCAATACCAATTACAGTAAGGCAGCTGGAAGCTATTGTTAGGTTGAGTGAGGCACTTGCCAAAATGAAGCTATCTCATATTGCTACTGAGGAGCATGTGCAAGAAGCAGTAAGGCTTTTCACCGTGTCTACAATGGATGCTGCTAGGTCTGGAATACACCAACAAATCAGTCTCACACCAGAAATGGCAAATGAAATTAAGCAAGCAGAAACTCAGATAAAGAGAAGAATTGGGATTGGAAACCACATATCGGAAAGGAGGCTTATTGATGACCTCAGCAGAATGGGAATGAATGAATCCATTGTGAGAAGAGCTCTTGTGATCATGCACCAGAGAGACGAAGTAGAATACAAGCGAGAAAGGCGTGTTATATATAGGAAAGCATGA 423 0.4279 MRQQANETGEAAAIPITVRQLEAIVRLSEALAKMKLSHIATEEHVQEAVRLFTVSTMDAARSGIHQQISLTPEMANEIKQAETQIKRRIGIGNHISERRLIDDLSRMGMNESIVRRALVIMHQRDEVEYKRERRVIYRKA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211625g00002 140 Gene3D - 1 77 IPR027417 -
Stsc211625g00002 140 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 103 IPR031327 GO:0003677|GO:0005524|GO:0032508
Stsc211625g00002 140 Pfam MCM AAA-lid domain 1 55 IPR041562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211625g00002 Stsc-Chr211625 2863 4578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211625g00002 1 140 Core DNA Replication Machinery Family AT2G07690 75.714 4.36e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211625g00002 K02209 - gmx:100779483 254.603