Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211623g00011 ATGGAGAGAAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAGGCTTCTAAGGAGGACCAGGAGGAGTGGACTGCAGATTTGTCGCAGCTTTTCATTGGGAACAAGTTTGCATCTGGAGCTCACAGTAGAATCTACCGTGGAATTTACAAGCAGAGAGCCGTAGCTGTGAAAATGGTGAGGATTCCGACACAGGACGAGGAGAGGAGATCCTTGCTTGAGCAGCAGTTCAAATCTGAAGTTGCTTTGCTTTCACGTCTCTTTCATCCAAACATAGTTCAGTTTATTGCAGCTTGTAAAAAACCGCCAGTGTACTGTATCATAACAGAATACATGTCACAAGGAACTCTGAGGATGTATCTGAACAAGAAAGAGCCATACTCTCTTTCAATTGAAACAATACTAAGGTTAGCTCTTGACATATCTAGGGGAATGGAGTACCTTCACTCGCAAGGTGTCATCCACAGAGATCTCAAGTCAAATAATCTTCTTCTCAACGACGAGATGAGGGTTAAGGTAGCAGATTTTGGCACATCTTGTCTGGAAACAAGGTGTCGCGAGACCAAAGGAAACATGGGAACTTATCGTTGGATGGCGCCAGAGATGATTAAGGAGAAACCTTACACTCGCAAAGTTGATGTGTATAGCTTTGGTATTGTGCTTTGGGAACTCACAACTGCTTTGCTTCCCTTCCAAGGAATGACCCCAGTCCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAGAGGCCACCGCTGCCGGCGAGTTGTCAGCCAGCACTAGCACACCTGATAAAGCGTTGCTGGGCAGCAAACCCATCAAAGAGGCCAGACTTCAGTGACATAGTGGCCACTCTTGAGAAGTATGATGAATGTGTGAAGGAGGGACTTCCCTTAACTCATCATTCAAGACTTGCTGTCAGCAGAAACCTCATTGAACGCTTAAAAGGCTGTGTTTCCATGAGTTCCTCCATACCTGTACATGCTTAA 1017 0.4543 MERKRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQDEERRSLLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVATLEKYDECVKEGLPLTHHSRLAVSRNLIERLKGCVSMSSSIPVHA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211623g00011 338 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 37 298 - -
Stsc211623g00011 338 Gene3D Phosphorylase Kinase; domain 1 30 123 - -
Stsc211623g00011 338 Pfam Protein tyrosine and serine/threonine kinase 43 295 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 SMART serkin_6 41 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211623g00011 338 SUPERFAMILY Protein kinase-like (PK-like) 18 295 IPR011009 -
Stsc211623g00011 338 FunFam Serine/threonine-protein kinase isoform 1 31 123 - -
Stsc211623g00011 338 CDD STKc_MAP3K-like 48 295 - -
Stsc211623g00011 338 PRINTS Tyrosine kinase catalytic domain signature 222 244 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 PRINTS Tyrosine kinase catalytic domain signature 203 213 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 PRINTS Tyrosine kinase catalytic domain signature 157 175 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Stsc211623g00011 338 Gene3D Transferase(Phosphotransferase) domain 1 124 321 - -
Stsc211623g00011 338 FunFam serine/threonine-protein kinase HT1 124 317 - -
Stsc211623g00011 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Stsc211623g00011 338 ProSiteProfiles Protein kinase domain profile. 41 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211623g00011 Stsc-Chr211623 42160 44748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211623g00011 1 338 MAP Kinase Kinase Kinase AT1G62400 87.826 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc211623g00011 PK_Tyr_Ser-Thr 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211623g00011 - - gmx:100799437 655.595