Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211622g00018 ATGGACAAAGCCACGTTACTGGGTGAAGTTGTTAAGCAAGTGAAGGAACTGAAGAAGAATGCAGAGGAGGCAAGCCAAGGATTCCTGATCCCAATGGATTTCGATGAAGCAGAAGGTGGAGAAGGAGATGGATCATCAATGTGTTACAGGGCAACCTTGTGCTGCATACCGGCCTGA 177 0.4802 MDKATLLGEVVKQVKELKKNAEEASQGFLIPMDFDEAEGGEGDGSSMCYRATLCCIPA 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211622g00018 58 Coils Coil 7 27 - -
Stsc211622g00018 58 PANTHER TRANSCRIPTION FACTOR BHLH30 1 55 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211622g00018 Stsc-Chr211622 82066 82510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211622g00018 2 55 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.667 4.86e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211622g00018 - - ahf:112783609 80.1073