Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211622g00009 ATGGCGGCGTTTCCATTTCGGAAACTGCAACACTGCTGGTTTCTACTGATACTACAGCACGTTGTGAGAGGAAGCCACGATGGTTGTTACACTTCATTGTTCAGCTTCGGAGATTCCCTAACTGATACCGGTAACACTTATTTCATTTACCCGCAACAGAGCCCCAACTGCCTCATCCCTCCGTACGGCCATACTTACTTCCATCACCCCAACGGTCGCTGCTCTGATGGCCGCCTCATCCCCGATTTCATTGCTGATTATATGGGAATCCCTCATTTGGAACCTTATCTTGGGTTCAAGAATGGCGCCGTGCCACGTCACAGCATTCAGCACGGACTCAATTTTGCGGCTGCTGGAGCCACCGCTTTGGATCGCACTTTCTTCCAAGAGAAGGGCTTTGTGGTTGACGGCGCTGCCGCCAATTATTCTCTCATGGTTCAGCTAGATTGGTTCAAGGATGTTCTAACTTATCTCTGCACTTCTCCTTCAAGCTGTAAAGAATTTCTTGGCAGCTCCTTATTTATTGTGGGAGAGATTGGAGGAAATGATTATGGTTATCCCTTGTCTGAAACAACAGATCTTCAAGTGCTTAGATCTTACGTTACTCAAGTAGTATCTCTTGTTTCTTCAGTCATCATAGACTTGATTGATCTAGGGGCCAGAACCCTTATGGTTCCTGGAAGTTTACCACTTGGATGCAATCCAGCCTATTTAACAAGGTTTGCAGTTATGGAAAAAGATGAGTTTGACCAATCTGGCTGTTTGAAATGGTTAAACAACTTCTTTGGTTACCACAATCAGCTGCTCCAAATCGAACTTCGTCGGCTTCAAGTGCTGTATCCCCATGTCAATATCATCTATGCAGATTATTTCCATGATGCATTACGCATGTACCGTTCTCCAAAACAATTTGGTTTTGGTACAGATTTCAACAAGGTTTGCTGTGGAGGTGGAGGACCATACAATTTCAATGATACAGCTCTATGTGGTGATGCAGGGGTCATAGCTTGTGATGATCCTTCAAAATATATTTACTGGGATGGTTATCATTTTACTGAAGCTGCATATAGATGGATGGCCAAGGGGTTAGTATATGGACCATACACCTCTCCTAAGCTTAGTCTCCATTGTATTACAATTGAGAGACCTCTGGAGATTTGA 1161 0.4419 MAAFPFRKLQHCWFLLILQHVVRGSHDGCYTSLFSFGDSLTDTGNTYFIYPQQSPNCLIPPYGHTYFHHPNGRCSDGRLIPDFIADYMGIPHLEPYLGFKNGAVPRHSIQHGLNFAAAGATALDRTFFQEKGFVVDGAAANYSLMVQLDWFKDVLTYLCTSPSSCKEFLGSSLFIVGEIGGNDYGYPLSETTDLQVLRSYVTQVVSLVSSVIIDLIDLGARTLMVPGSLPLGCNPAYLTRFAVMEKDEFDQSGCLKWLNNFFGYHNQLLQIELRRLQVLYPHVNIIYADYFHDALRMYRSPKQFGFGTDFNKVCCGGGGPYNFNDTALCGDAGVIACDDPSKYIYWDGYHFTEAAYRWMAKGLVYGPYTSPKLSLHCITIERPLEI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211622g00009 386 CDD SGNH_plant_lipase_like 31 367 IPR035669 -
Stsc211622g00009 386 Gene3D SGNH hydrolase 20 365 IPR036514 -
Stsc211622g00009 386 Pfam GDSL-like Lipase/Acylhydrolase 33 361 IPR001087 GO:0016788
Stsc211622g00009 386 SUPERFAMILY SGNH hydrolase 35 363 - -
Stsc211622g00009 386 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211622g00009 Stsc-Chr211622 34651 36681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211622g00009 24 365 Pollen Coat Proteome AT1G75930 26.062 2.13e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211622g00009 - - gmx:100818440 542.347