Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211615g00002 ATGAATGAAAATAACAGAATGGTTTCCACATCTCAGAAGAAGAGCCTCCACTCTCTCATGGCAGCTAACCTCAGCAAACTCACCATACCTTGTTCTTCTTCTTCTTCATCATCAACTCCTCTAAGCAACGAACATGATGAATTCGACTTTTCTCATGTATTCGGCCACCACCACGAAGAAAGCAGCACCACCCCAGCCTCAAGTGCAATGAGCCCGCACGTGATCCACAGCAGGTCCCACTCCTTCGTGGGTCCCTCCCCTCGCGTGGCCCCACCCTCCAACCCCGTCCTCTCCTTCGTCAACGAACTCTCTTCCCAGAGCGAGGGAGAAGAATCCGAACAGCTCCCTCTCAATGAAATCCACAATACCGAAGAAGAGAAAGTGAGCACTAGAATTGGGCCTACGGATTTCGAGATTTTGAGGGTTGTTGGCCAGGGTTCGTTTGGGAAGGTGTTTCTTGTACGGAAGAAGAAGCAGCAGAAGAAAGAGGGTGAAGAAGAAGAGTGCTGTGATGATGTGTTTGCGATGAAGGTGATGAGGAAGGAAACCATCATCAAGAAGAACCATGTGGATTACATGAAAGCTGAGAGAGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAGCTTCGCTACTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGTCATCTCTTCTTTCATCTGTATCGACAGGGCATCTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAACGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATAGTGATGGGCATGTGATGCTAACAGATTTCGGATTGTCTAAAGAGATTGACGAATCAGGCCGATCCAACTCTCTGTGTGGGACCGTGGAATATATGGCTCCGGAAATCATACTGGGTAAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGGGAAAGTTAAACTTCCCCCAACCGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAGTGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAGAACTTGAACCTAAGTTCAAACCAGACGTGTCCGGTAAAGACTGTACAGCTAACTTTGACCAATGCTGGACAGCAATGCCTCCCGACGACTCACCAGCTTCCACGCCTACGGCCGGTGACCATTTCCATGGCTACACTTATGTCGCACCAAACCCTTGGCTTTCGTCCAAATAG 1419 0.4623 MNENNRMVSTSQKKSLHSLMAANLSKLTIPCSSSSSSSTPLSNEHDEFDFSHVFGHHHEESSTTPASSAMSPHVIHSRSHSFVGPSPRVAPPSNPVLSFVNELSSQSEGEESEQLPLNEIHNTEEEKVSTRIGPTDFEILRVVGQGSFGKVFLVRKKKQQKKEGEEEECCDDVFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDSDGHVMLTDFGLSKEIDESGRSNSLCGTVEYMAPEIILGKGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKGKVKLPPTVSTEAHSLLKGLLQKDPSTRLGSGPNGDEQIKSHKWFRPINWKKLEARELEPKFKPDVSGKDCTANFDQCWTAMPPDDSPASTPTAGDHFHGYTYVAPNPWLSSK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211615g00002 472 Gene3D Phosphorylase Kinase; domain 1 135 447 - -
Stsc211615g00002 472 FunFam Non-specific serine/threonine protein kinase 228 423 - -
Stsc211615g00002 472 Pfam Protein kinase C terminal domain 425 462 IPR017892 GO:0004674|GO:0005524|GO:0006468
Stsc211615g00002 472 ProSiteProfiles Protein kinase domain profile. 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211615g00002 472 MobiDBLite consensus disorder prediction 114 128 - -
Stsc211615g00002 472 MobiDBLite consensus disorder prediction 56 128 - -
Stsc211615g00002 472 FunFam Non-specific serine/threonine protein kinase 135 252 - -
Stsc211615g00002 472 PANTHER RIBOSOMAL PROTEIN S6 KINASE 47 466 - -
Stsc211615g00002 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Stsc211615g00002 472 SMART serkin_6 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211615g00002 472 ProSiteProfiles AGC-kinase C-terminal domain profile. 405 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc211615g00002 472 Pfam Protein kinase domain 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211615g00002 472 SUPERFAMILY Protein kinase-like (PK-like) 125 449 IPR011009 -
Stsc211615g00002 472 Gene3D Transferase(Phosphotransferase) domain 1 228 423 - -
Stsc211615g00002 472 MobiDBLite consensus disorder prediction 97 113 - -
Stsc211615g00002 472 MobiDBLite consensus disorder prediction 60 75 - -
Stsc211615g00002 472 SMART pkinase_C_6 405 464 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211615g00002 Stsc-Chr211615 22297 26230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211615g00002 47 465 AGC Kinase Gene Family AT3G08720 59.908 1.37e-180 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Stsc211615g00002 Pkinase 3.5e-72 CL0016