Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211614g00014 ATGGACGACGATTGGGATCTCCACGCCGTCGTTAGAGGCTGCGCCACCGTTTCCTCCACCACCTCCACCACCACCACCACCACCACTTCCATCCAACCTCCACCTTCTTCTTCTTCATGTGGATTCTTCTCAATTCTCCCCACTACTAATACCCAACAACAAAGTAATGTTTTTTCAGCTTCCAACATCAACAACAACCCTTTTGAATCACCAACCTCCATTGATAAACTTCATCATAATCATAATCTTTGCAAGCCTTTCTTCTTCAAATCACAGCCTTTTCACTCTTTTCAATCCTCCTCCTCTTCCTCTTCTCCTCCTCCTTCTTCTTCTTTCTCTTATTCTTCTTCTTCATCATCACTTAATTCAGCTCTGACACAGCAGCAACAGAATTGTAATAATAACAATAAGAACTCTCACCATGCAGATTCTGCCACCACCACCCCACGATCTAAGAGAAGGAAGAATCAGGTTAAGAAAGTTTGTCAAGTTTCAGCTGAGAATCTTTCCTCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGCTCAAAGGGATGTTTGGCTAGAAAACAAGTTGAAAGGAACAGATCAGATCCAACAATGTTCATAGTTACATTCACTGGTGAACACAACCACCCTGCTCCAACTCATAGAAACTCACTTGCTGGCTCTTCACGCCAAAAGCTACAAGCAGGGGACACTGAAAAGGCCCTCACAATGAAGCCGGTCTCGGTTTCGGCTTCTCCTTCCACTTCAGGAGTGGAAGAAGAGGCTGAAACCGAGGCCATGCTGCCGGCGCAGAAGTCGGAGAGCGAAGAGGACAACATGGAGGATTATTTGATGAATGATGATGATGGTGGGGTTGAGGAAACTGATCAGCTTGGTTCACCAGATATGGAGATAACTGATGATTTCTTTGAAGGTTTGGATGAACTTACAGCAGCCACTGATGGAGACTCATGCTTTTCTGAGCCCTTTTCAACAACAAGTGTTCCTTCCCTTCCTCCTTTGGTGGCCAATAGTGCTGCCACTACTGCTGGTGGTAGCTGA 1098 0.4517 MDDDWDLHAVVRGCATVSSTTSTTTTTTTSIQPPPSSSSCGFFSILPTTNTQQQSNVFSASNINNNPFESPTSIDKLHHNHNLCKPFFFKSQPFHSFQSSSSSSSPPPSSSFSYSSSSSSLNSALTQQQQNCNNNNKNSHHADSATTTPRSKRRKNQVKKVCQVSAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTFTGEHNHPAPTHRNSLAGSSRQKLQAGDTEKALTMKPVSVSASPSTSGVEEEAETEAMLPAQKSESEEDNMEDYLMNDDDGGVEETDQLGSPDMEITDDFFEGLDELTAATDGDSCFSEPFSTTSVPSLPPLVANSAATTAGGS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 123 145 - -
Stsc211614g00014 365 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 292 307 - -
Stsc211614g00014 365 SUPERFAMILY WRKY DNA-binding domain 165 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 123 162 - -
Stsc211614g00014 365 Gene3D WRKY domain 154 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 228 248 - -
Stsc211614g00014 365 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 331 IPR044810 GO:0003700
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 336 365 - -
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 226 317 - -
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 277 291 - -
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 257 271 - -
Stsc211614g00014 365 MobiDBLite consensus disorder prediction 332 365 - -
Stsc211614g00014 365 FunFam WRKY transcription factor 22 154 224 - -
Stsc211614g00014 365 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00014 365 Pfam WRKY DNA -binding domain 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211614g00014 Stsc-Chr211614 67318 69180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211614g00014 1 364 WRKY Transcription Factor Family AT4G01250 46.070 4.68e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211614g00014 WRKY 8.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211614g00014 K13425 - gmx:100815829 294.278