Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211614g00004 ATGGAAAACCAACAACACCCTTTACCACCACAAGATGATAATAATATTATTGATGAGTCTCAATTTCCATTCTTCTTCCTTCCATCACCACCACCACCACCCTCTTCATCTTCTTCTTCATCCATGATGATGATGATGCAAAACCCTATGGTTGCTCCTAATGATAATAATAATGATCAATTAGGACTAATGCAAGAAAATATTGATTGGGTTAGTTTCTTCTCTAATGGACAAAACAACAACATGCTTATTGGAGATCATACCAATAAGGAAACAACAATGGAATGTGCTTCTTCTTCTGTTCCTGCTTCTTCTTCTATGTCGTCGTCGTCGTCTTTGATGGCTGAAAATAATAGTATAGGGTTTCACCAGAGCGGCGAGGACGAGAAAAGGAAAGGAGGGAGATTAATGAAGAAGAAGATGAAGCCAAGGTTTGCGTTTCAAACAAGAAGTGCAGATGATATTCTTGATGATGGTTACCGGTGGAGAAAATATGGACAGAAGGCTGTGAAGAACAGCATGTATCCAAGAAGCTACTACCGATGCACACATCACACATGCAATGTGAAGAAACAAGTTCAAAGGTTATCCAAAGACACAAGCATAGTGGTCACAACTTATGAAGGAATTCACAATCACCCATGTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAGGCAAATGCAATTTCTAGCTAGCTTCTAA 708 0.3955 MENQQHPLPPQDDNNIIDESQFPFFFLPSPPPPPSSSSSSSMMMMMQNPMVAPNDNNNDQLGLMQENIDWVSFFSNGQNNNMLIGDHTNKETTMECASSSVPASSSMSSSSSLMAENNSIGFHQSGEDEKRKGGRLMKKKMKPRFAFQTRSADDILDDGYRWRKYGQKAVKNSMYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLRQMQFLASF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211614g00004 235 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00004 235 Gene3D WRKY domain 141 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00004 235 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00004 235 SUPERFAMILY WRKY DNA-binding domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211614g00004 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 217 IPR044810 GO:0003700
Stsc211614g00004 235 FunFam WRKY transcription factor 57 142 216 - -
Stsc211614g00004 235 Pfam WRKY DNA -binding domain 157 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211614g00004 Stsc-Chr211614 38859 40880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211614g00004 113 235 WRKY Transcription Factor Family AT5G41570 68.293 3.27e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211614g00004 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211614g00004 - - gmx:100796481 222.631