Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211609g00011 ATGATGTGTTTATTCTTCAAACGAAAATCTAAATCCGACTCAGAACTGCAAAAACCAACCAAGAACTCGCTGAATCCTCCTCTCAAGTCCACCAACTCTCTATCGTCATTGCCATCGCCATCTCCAAGGGGTGTGAGGGATTTGTACAAGGAGAACCAGCACAACTTCAGGATCTTCACTCTCAGAGAGCTCATTGATGCAACCAACGGTTTCAATAGGATGCTCAAGATCGGAGAAGGTGGTTTCGGCAGTGTTTACAGAGGAACCATTACACCTCTTCATCAACATGATGATCCAATTCTCGTTGCTGTCAAAAAGCTCAACACTCGTGGCTTTCAGGGGCATAAGGAATGGCTTACAGAAGTTCAATTTCTTGGCATCGTTAATCACCCCAATTTAGTTAAGCTATTGGGATACTGCTCTGTAGACACCGAGAGAGGGATTCAACGGTTATTAGTCTATGAATTCATGCCAAACAAGAGCCTGGAGGATCATCTATTCAACCATTCTTTACCTCACTTGCCTTGGAATACTAGATTGCACATCATGCTTGGTGCTGCTCAAGGATTGGATTACTTACATCACGGATTCGAGGTTCAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGCTGTTGGACAAAAGCTTCCATCCCAAGCTTTCGGATTTCGGTCTAGCTAGGGAAGGCCCAACCGGTGGCCACACTCATGTATCTACTGCAGTAAGTTCATTGCACACAATCTATTTATTCTCAATCCCTAGTTTATGCATTCTTGATTCTTTGTCTACAATCATGGTTCTTGAACTAATTTAA 816 0.4277 MMCLFFKRKSKSDSELQKPTKNSLNPPLKSTNSLSSLPSPSPRGVRDLYKENQHNFRIFTLRELIDATNGFNRMLKIGEGGFGSVYRGTITPLHQHDDPILVAVKKLNTRGFQGHKEWLTEVQFLGIVNHPNLVKLLGYCSVDTERGIQRLLVYEFMPNKSLEDHLFNHSLPHLPWNTRLHIMLGAAQGLDYLHHGFEVQVIYRDFKSSNVLLDKSFHPKLSDFGLAREGPTGGHTHVSTAVSSLHTIYLFSIPSLCILDSLSTIMVLELI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211609g00011 271 Gene3D Transferase(Phosphotransferase) domain 1 157 251 - -
Stsc211609g00011 271 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Stsc211609g00011 271 SUPERFAMILY Protein kinase-like (PK-like) 53 241 IPR011009 -
Stsc211609g00011 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Stsc211609g00011 271 Pfam Protein tyrosine and serine/threonine kinase 76 230 IPR001245 GO:0004672|GO:0006468
Stsc211609g00011 271 PANTHER OS01G0588500 PROTEIN-RELATED 24 244 - -
Stsc211609g00011 271 MobiDBLite consensus disorder prediction 17 40 - -
Stsc211609g00011 271 ProSiteProfiles Protein kinase domain profile. 71 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211609g00011 271 FunFam Os07g0541700 protein 157 243 - -
Stsc211609g00011 271 Gene3D Phosphorylase Kinase; domain 1 45 156 - -
Stsc211609g00011 271 MobiDBLite consensus disorder prediction 6 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211609g00011 Stsc-Chr211609 41001 43187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211609g00011 3 271 Glycoside Hydrolase AT3G07070 38.889 1.57e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc211609g00011 PK_Tyr_Ser-Thr 5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211609g00011 - - adu:107487526 413.69