Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211609g00001 ATGAAAGCAACTAACCTTCCTGCTTTGAATTTACTCTCCCAACAACTTTCTCACCGTAATTCTCACCTCACCATGGATGAAATCCCAACCTTTCTAAATTCCAGTTTGAAGAAGATTCCTGTAACGACGAATAAAGGTTCACAGTTGACGATCTTCTATGGCGGTGAAGTTATAGTGTTTGATGATATTGAATTGGAGAAGGCGAAAGAGATAATGTGTTTTGCAAGCAAAGGTTCATCCACGATCTCGAAATCAAACCACCATAACAATAACATGAAGAACAACTACGGTTACAAATTGGCTCAGCGTTGTTCATTTCCAAGTAGAAATTCTTGTGTTGTTGTTCCTCCAACTTCTCCCTTTCCTTTTATGATCCCTACCATTCCCAACAATTCGGTTAGGGACCTTCCCCACACTCAACCACCTTCCAGATCCGTTGTTTCTGATCTACCACTTGCTAGGAAAGCTTCACTACACCGATTCTTGGAGAAGAGAAAGGATAGAATTGCTGCAAGAGCACCATATCAAACAAGCAGCCCCATTTCATGGCTTGGCATGGTACCTAGATCACCACAAGAGAATTCTGAGACCAGTTCCAGTGTAGTATAA 609 0.4154 MKATNLPALNLLSQQLSHRNSHLTMDEIPTFLNSSLKKIPVTTNKGSQLTIFYGGEVIVFDDIELEKAKEIMCFASKGSSTISKSNHHNNNMKNNYGYKLAQRCSFPSRNSCVVVPPTSPFPFMIPTIPNNSVRDLPHTQPPSRSVVSDLPLARKASLHRFLEKRKDRIAARAPYQTSSPISWLGMVPRSPQENSETSSSVV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211609g00001 202 Pfam Jas motif 151 176 IPR018467 -
Stsc211609g00001 202 SMART tify_2 42 77 IPR010399 -
Stsc211609g00001 202 MobiDBLite consensus disorder prediction 181 202 - -
Stsc211609g00001 202 Pfam tify domain 46 76 IPR010399 -
Stsc211609g00001 202 ProSiteProfiles Tify domain profile. 42 77 IPR010399 -
Stsc211609g00001 202 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 187 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211609g00001 Stsc-Chr211609 1947 4035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211609g00001 49 187 Tify Gene Family AT1G19180 36.478 6.53e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc211609g00001 tify 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211609g00001 K13464 - gmx:100306332 162.54