Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211608g00017 | ATGGAGAAGAAGGAGATAATGATGGGTGTGAAGATGGAAGATGCATCACTATTCACTTCTTGTTTCAGCAAAGGCAATAATAACATCAATCCATTATGGAGCGTCTTTGATTTGTGTGAAGGAGCCGAGGACAAGGATTCTTTAGGGTTTATGGAGCTACTGGGCGTGCATCAAGACTACTACGGTGGTGGTGCTCCTCCTCCTCTGCTTGCTGATAATAATTGTTTAGTGAAGGATTCAACAGAAGAAGCTACTATTGTGAAAGAGTGTCCTTCTAATTCAGAGGTTCTCAGTAGTAATAATAACCACCAACAGCAGCAACAACCTTCTTCTAAGTCTAGTTCTTCAGCTTCACCTCTTTCATCTTCTGTGTCCACCACTACTACAGTGGACCAAGCTGCACCGTCACCTCAACACGCCGACAAACTGTTGAAAGCGAAGAAGACAAATGGGAAGAAAAGAGAGAGGGAAGCTCGATACGCGTTCATGACGAAAAGCGAGGTGGATCATCTCGAAGATGGTTACAGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGGTTCATGTAATGTGAAGAAGCGTGTGGAAAGGTCTTTCACTGATCCAACAATTGTGGTCACAACCTATGAAGGTCAACACACGCATCCAAGCCCACTTCTCATGCCTCGCTCTTCTTCATCTTCAATAATCCCTCAAACCTACTTCTCCCAACACTATCTACACCCACACCAACGGCAACTCTTATTCAATGCATTCCCTTCTATTGATTTTCCTCCTCCTCCGCTTCCTCCTTCTTCTTCGGCTCAGATCTCCAACAATGCATTGTTTCCTTTAAGCGACCATGGCCTTCTTCAAGATGTTCTTCCTTCACATATGTTCAAGCAGGACTAG | 930 | 0.4452 | MEKKEIMMGVKMEDASLFTSCFSKGNNNINPLWSVFDLCEGAEDKDSLGFMELLGVHQDYYGGGAPPPLLADNNCLVKDSTEEATIVKECPSNSEVLSSNNNHQQQQQPSSKSSSSASPLSSSVSTTTTVDQAAPSPQHADKLLKAKKTNGKKREREARYAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSGSCNVKKRVERSFTDPTIVVTTYEGQHTHPSPLLMPRSSSSSIIPQTYFSQHYLHPHQRQLLFNAFPSIDFPPPPLPPSSSAQISNNALFPLSDHGLLQDVLPSHMFKQD | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211608g00017 | 309 | Pfam | WRKY DNA -binding domain | 172 | 229 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211608g00017 | 309 | SUPERFAMILY | WRKY DNA-binding domain | 163 | 231 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211608g00017 | 309 | Gene3D | WRKY domain | 156 | 232 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211608g00017 | 309 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 73 | 251 | IPR044810 | GO:0003700 | |
Stsc211608g00017 | 309 | MobiDBLite | consensus disorder prediction | 92 | 158 | - | - | |
Stsc211608g00017 | 309 | MobiDBLite | consensus disorder prediction | 141 | 158 | - | - | |
Stsc211608g00017 | 309 | ProSiteProfiles | WRKY domain profile. | 166 | 231 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211608g00017 | 309 | MobiDBLite | consensus disorder prediction | 92 | 135 | - | - | |
Stsc211608g00017 | 309 | SMART | WRKY_cls | 171 | 230 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc211608g00017 | 309 | FunFam | WRKY transcription factor 57 | 157 | 231 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211608g00017 | Stsc-Chr211608 | 83524 | 84954 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211608g00017 | 32 | 309 | WRKY Transcription Factor Family | AT2G47260 | 42.025 | 2.25e-54 | 178 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc211608g00017 | WRKY | 2.8e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211608g00017 | - | - | ahf:112758162 | 423.705 |