Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211608g00017 ATGGAGAAGAAGGAGATAATGATGGGTGTGAAGATGGAAGATGCATCACTATTCACTTCTTGTTTCAGCAAAGGCAATAATAACATCAATCCATTATGGAGCGTCTTTGATTTGTGTGAAGGAGCCGAGGACAAGGATTCTTTAGGGTTTATGGAGCTACTGGGCGTGCATCAAGACTACTACGGTGGTGGTGCTCCTCCTCCTCTGCTTGCTGATAATAATTGTTTAGTGAAGGATTCAACAGAAGAAGCTACTATTGTGAAAGAGTGTCCTTCTAATTCAGAGGTTCTCAGTAGTAATAATAACCACCAACAGCAGCAACAACCTTCTTCTAAGTCTAGTTCTTCAGCTTCACCTCTTTCATCTTCTGTGTCCACCACTACTACAGTGGACCAAGCTGCACCGTCACCTCAACACGCCGACAAACTGTTGAAAGCGAAGAAGACAAATGGGAAGAAAAGAGAGAGGGAAGCTCGATACGCGTTCATGACGAAAAGCGAGGTGGATCATCTCGAAGATGGTTACAGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGGTTCATGTAATGTGAAGAAGCGTGTGGAAAGGTCTTTCACTGATCCAACAATTGTGGTCACAACCTATGAAGGTCAACACACGCATCCAAGCCCACTTCTCATGCCTCGCTCTTCTTCATCTTCAATAATCCCTCAAACCTACTTCTCCCAACACTATCTACACCCACACCAACGGCAACTCTTATTCAATGCATTCCCTTCTATTGATTTTCCTCCTCCTCCGCTTCCTCCTTCTTCTTCGGCTCAGATCTCCAACAATGCATTGTTTCCTTTAAGCGACCATGGCCTTCTTCAAGATGTTCTTCCTTCACATATGTTCAAGCAGGACTAG 930 0.4452 MEKKEIMMGVKMEDASLFTSCFSKGNNNINPLWSVFDLCEGAEDKDSLGFMELLGVHQDYYGGGAPPPLLADNNCLVKDSTEEATIVKECPSNSEVLSSNNNHQQQQQPSSKSSSSASPLSSSVSTTTTVDQAAPSPQHADKLLKAKKTNGKKREREARYAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSGSCNVKKRVERSFTDPTIVVTTYEGQHTHPSPLLMPRSSSSSIIPQTYFSQHYLHPHQRQLLFNAFPSIDFPPPPLPPSSSAQISNNALFPLSDHGLLQDVLPSHMFKQD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211608g00017 309 Pfam WRKY DNA -binding domain 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211608g00017 309 SUPERFAMILY WRKY DNA-binding domain 163 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211608g00017 309 Gene3D WRKY domain 156 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211608g00017 309 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 251 IPR044810 GO:0003700
Stsc211608g00017 309 MobiDBLite consensus disorder prediction 92 158 - -
Stsc211608g00017 309 MobiDBLite consensus disorder prediction 141 158 - -
Stsc211608g00017 309 ProSiteProfiles WRKY domain profile. 166 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211608g00017 309 MobiDBLite consensus disorder prediction 92 135 - -
Stsc211608g00017 309 SMART WRKY_cls 171 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211608g00017 309 FunFam WRKY transcription factor 57 157 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211608g00017 Stsc-Chr211608 83524 84954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211608g00017 32 309 WRKY Transcription Factor Family AT2G47260 42.025 2.25e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211608g00017 WRKY 2.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211608g00017 - - ahf:112758162 423.705