Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211607g00008 ATGGATCTTGAGTCTGTGATCCACAACAAGAACCCAATTAAGGAGCAATCATGGAAAACAGTGCTGACTTTGGCTTATCAAAGCTTGGGAGTTGTCTATGGTGACTTGAGCACTTCACCACTCTATGTGTATAAGAGCGCCTTTGCTGAGGATATTCAGCATTCAGACACCAATGAAGAAATCTTTGGTGTGTTGTCCTTTGTGTTCTGGACACTGACACTGATTCCACTTCTCAAGTATGTGTTCATTGTGCTGAGAGCTGATGACAATGGTGAAGGGGGAACTTTTGCTCTCTACTCCTTGCTATGCAGGCATGCCAGGGTCAGCCTCTTGCCTAGCACTCAGCTTGCTGATCAGGATTTAACTGAGTACACCATTGATGGAGGTGGAACTCTTCAAGATAACAAGAGGAATAATGTTGGGTGGGGATTGAAATTGAAGTCTTTGTTGGAGAAGCACAAGGTTCTCCAAAGGGTGCTTCTTGTTCTTGCCTTGATTGGAACTTGCATGGTTATTGGGGATGGTGTCCTAACACCAGCAATTTCTGTTTTTTCTGCTGTGTCTGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACAGATATGTTGAGGTTCCAGTTGCCTGCATAATACTGCTGTTTTTGTTTGCACTTCAACATTACGGGACCCACCGTGTCGGATGCCTGTTCGCACCGGTTGTGCTGACTTGGCTGCTATGCATAAGTGCGATTGGAGTTTACAATATCTTCCATTGGAACCCCCATGTTTATCAAGCTCTTTCCCCATACTACATGTTCAAATTTCTGAGGAAGACACAAAAGGGAGGGTGGATGTCTTTGGGTGGGATTCTACTGTGTATAACAGGTTCCGAAGCCATGTATGCTGATCTAGGACACTTTACACAATTGTCAATCAAGATAGCTTTCACCTTTTTGGTATATCCTTCCTTGATCCTAGCATATATGGGACAAGCTGCATATCTATCAAAGCATCATGAAATGGAAAGTGATTATCGGATTGGCTTCTATGTATCGGTACCTCGACCACTTAGATGGCCTGTTCTTGCAATTGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCAGTCATCACCGGAACTTTCTCGATAATTAAACAATGCTCGGCTTTGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGATTCATGGCCAGATTTACATTCCAGAGATAAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTGTGGTTGGATTCCGAGATACCAAGCGCATGGGAAACGCAGCAGGGTTGGCTGTCATAACTGTCATGTTGGTGACCACTTGCCTAATGTCTCTAGTTATGATTTTATGCTGGCATAAAAGCGTTTGGCTCGCTGTTTGCTTTATTTTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCTGCTTCACTCATCAAGTTCCTAGAGGGTGCTTGGGTCCCCATTGCCCTCTCATTCATCTTTCTTATTGCCATGTATGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTCCAAAACAAGGTCCCGATCAACTGGCTCCTCGGTTTGGGACCCAATCTTGGAATTGTTAGAGTTAAGGGAATTGGCCTCATACACACTGAGCTAGTATCCGGGATCCCGGCGATTTTCTCGCACTTTGTTACCAATCTGCCAGCTTTCCATCAAGTTGTGATTTTCCTCTGCGTCAAATCTGTTCCGGTGCCTCATGTCAGGCCCGAAGAAAGGTTCTTAGTCGGTAGAGTCGGCCCGAAGGAGTATAGGCTCTATAGGTGCATAGCACGGTACGGCTACCGTGATGTTCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTTTGCAGCATAGCGGAATTCATCCGATCAGACACTTCCGAATACGGCTTAGGACTAGGGAATTTCGAGGACGATACGAAAATGACAGTTGTTGGGACCTCGGCATCAAAGTTGGAGGGCGTGAGGATGTCAGTGGACGATCAAGAAGACACTTGTCCTGAAACAGAAGGCACGTCTGAGCTGAGGGTGGTTAGGTCTCCTACAATTCGGAAACGAGTGAGGTTTGTCGTACCGGATAGTCCGCAAATCGATATGGAAGCAAGGGAGGAGTTGCATGAGCTGATGGAAGCAAAGGAAGCCGGAATGGCATTCATAATGGGACACTCATATGTTAGAGCAAAAAGAGGATCAAGCTGGATCAAGAAAGTTGTTATCAATTATGGGTATGATTTCTTGAGGAGANNNNNNNNNNGAGGACCAACCTATGCTCTAAGTATACCTCATGCATCAACCTTAGAGGTGGGAATGATCTATCATGTGTGA 2352 0.4498 MDLESVIHNKNPIKEQSWKTVLTLAYQSLGVVYGDLSTSPLYVYKSAFAEDIQHSDTNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPSTQLADQDLTEYTIDGGGTLQDNKRNNVGWGLKLKSLLEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACIILLFLFALQHYGTHRVGCLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMFKFLRKTQKGGWMSLGGILLCITGSEAMYADLGHFTQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHEMESDYRIGFYVSVPRPLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWSLMLLCLAIVVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVMILCWHKSVWLAVCFILFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIAMYVWHYGTLKKYEFDVQNKVPINWLLGLGPNLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDMEFEKDLVCSIAEFIRSDTSEYGLGLGNFEDDTKMTVVGTSASKLEGVRMSVDDQEDTCPETEGTSELRVVRSPTIRKRVRFVVPDSPQIDMEAREELHELMEAKEAGMAFIMGHSYVRAKRGSSWIKKVVINYGYDFLRRXXXXGPTYALSIPHASTLEVGMIYHV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211607g00008 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc211607g00008 783 Pfam K+ potassium transporter 26 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc211607g00008 783 NCBIfam potassium uptake protein 24 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211607g00008 Stsc-Chr211607 47084 52227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211607g00008 1 783 Inorganic Solute Cotransporters AT5G14880 76.396 0.0 1208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211607g00008 K03549 - gmx:100793387 1388.24