Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211602g00001 ATGGTGTACCACATTTTAGGCCACTATGTTCCACAACTTTCCGAACTCATATATGATAACAATCGTGATCCTTCCAAGGAAGACTACATTAAATTCAAGGGATTCATGATTGGGAATGCACTGTTAGACGATGAAACAGATCAAAAGGGAATGGTAGATTATGCTTGGGACCATGCTGTGATATCAGATGGTGTATACCATAACATCACATCAAATTGTGATTTCAAATTTGCAAATCTAACAGATGAAGGCTTATCAGAGGAATGCAATGATGCACTCAAGAAGTATTTTGATGTCTACAAGATCATTGACATGTACAGCTTATACACTCCAGCGTGTTTCACTAACACCAACAGCACCAACACAAGAAGGGATACCCCTAAAGTTGTCAAAGGCGTTGCCCCTCACACTTTCTCTAAATTTAATATGTGGCATCAAATACCAGCAAGTGGATATGATCCTTGTGCATCAGACTACACTGCAGCATATCTAAATAGGCCAGAAGTGCAAAAAGCATTGCATGCCAATGTCACCAAAATTTCATACAGATGGACTCATTGCAGTGATCAAATCAACATTTGGCATGGCTCACCTCAGTCCATGCTTCCTATTCTGAAGAAGCTCATTGCTGGTGGTATTCGGATATGGGTTTTTAGTGGAGATACTGATGGAAGAATTCCAGTAACTTCGACAAGATTAACATTGAGAAAATTGGGGCTTAACATTGTTCAAGATTGGACTCCTTGGTATACCAGCAGACAGGTAGGAGGATGGACAATTGAATTTGATGGGCTCACATTTGTGACAGTAAGAGGTGCTGGTCATCAGGTTCCAACTTTTCGTCCTAAGCAAGCTCTTCAGCTAATTAAACATTTCTTGATCAACAAGAAATTACCAGAGCAACCAATTAAACAGGGTCCTTTTTAG 927 0.3991 MVYHILGHYVPQLSELIYDNNRDPSKEDYIKFKGFMIGNALLDDETDQKGMVDYAWDHAVISDGVYHNITSNCDFKFANLTDEGLSEECNDALKKYFDVYKIIDMYSLYTPACFTNTNSTNTRRDTPKVVKGVAPHTFSKFNMWHQIPASGYDPCASDYTAAYLNRPEVQKALHANVTKISYRWTHCSDQINIWHGSPQSMLPILKKLIAGGIRIWVFSGDTDGRIPVTSTRLTLRKLGLNIVQDWTPWYTSRQVGGWTIEFDGLTFVTVRGAGHQVPTFRPKQALQLIKHFLINKKLPEQPIKQGPF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211602g00001 308 Gene3D - 201 294 - -
Stsc211602g00001 308 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 282 IPR001563 GO:0004185|GO:0006508
Stsc211602g00001 308 ProSitePatterns Serine carboxypeptidases, histidine active site. 265 282 IPR033124 GO:0004185
Stsc211602g00001 308 FunFam Carboxypeptidase 201 295 - -
Stsc211602g00001 308 SUPERFAMILY alpha/beta-Hydrolases 7 298 IPR029058 -
Stsc211602g00001 308 Pfam Serine carboxypeptidase 7 293 IPR001563 GO:0004185|GO:0006508
Stsc211602g00001 308 Gene3D alpha/beta hydrolase 3 125 IPR029058 -
Stsc211602g00001 308 Gene3D - 155 193 - -
Stsc211602g00001 308 FunFam Carboxypeptidase 151 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211602g00001 Stsc-Chr211602 145 2504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211602g00001 163 298 Calmodulin-binding Proteins AT2G22960 25.547 1.44e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211602g00001 K16297 - gmx:100807887 463.766